Vitis riparia (riverbank grape): 117915558
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Entry
117915558 CDS
T07274
Name
(RefSeq) ABC transporter F family member 1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vri03009
]
117915558
Ribosome biogenesis [BR:
vri03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
117915558
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_23
AAA_29
MMR_HSR1
AAA_14
AAA_15
AAA_27
RsgA_GTPase
AAA_28
AAA_24
AAA_22
VapE-like_dom
Motif
Other DBs
NCBI-GeneID:
117915558
NCBI-ProteinID:
XP_034687030
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Position
6:3970021..3977389
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AA seq
598 aa
AA seq
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MVSDASKKKAAAKKAAAAAKRGGKSAAAASSKAAASAAAADVQNGVDKMADMKISDRTCT
GVLCSHPLSRDIRIESLSVTFHGHDLIVDTELELNYGRRYGLLGLNGCGKSTLLTAIGCR
ELPIPEHMDIHHLTREIEASDMSALEAVISCDEERLKLEKEAEVLAAQDDGGGEALDRVY
ERLEAMDASTAEKRAAEILFGLGFNKTMQAKKTQDFSGGWRMRIALARALFMNPTILLLD
EPTNHLDLEACVWLEETLKNFDRILVVVSHSQDFLNGVCTNIIHMQNRKLKLYTGNYDQY
VQTRSELEENQMKQYKWEQDQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTE
KVVRDKILVFRFTDVGKLPPPVLQFVEVTFGYTPDNLIYKNIDFGVDLDSRIALVGPNGA
GKSTLLKLMTGDLFPIDGMVRRHNHLRIAQFHQHLTEKLDLEMSALLYMMREYPGNEEEK
MRAAIGKFGLTGKAQVMPMKNLSDGQRSRVIFAWLAYRQPHMLLLDEPTNHLDIETIDSL
AEALNEWDGGLVLVSHDFRLINQVAQEIWVCENQKVTRWEGDIMDFKMHLKSKAGLSD
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgacgcgagcaagaagaaggcagcggcgaagaaggccgcggcggccgccaag
aggggaggcaagtctgctgctgccgcatcttcgaaggcggcggcgtctgcggcggccgcc
gatgtacagaacggcgtcgacaagatggccgatatgaaaatatcagatcggacttgtact
ggtgtgctctgttcgcatcctctttcgcgcgatattcggatagagtctttatcggttact
ttccatggtcatgatcttatagtggatactgagctagagcttaactatggcagacgatat
ggtttacttggactgaatgggtgtggaaaatctaccctcctcactgcaattgggtgccga
gaacttcccattccagaacacatggacatccatcatctaaccagagagattgaagcttct
gacatgtctgcccttgaggctgtcataagctgtgatgaggagaggttgaaattggagaaa
gaagctgaagtgttggctgcacaggatgatggtggcggagaggcccttgatcgtgtatat
gagcgtttggaagccatggatgcatcaactgcagaaaagcgcgctgctgaaatcttgttt
ggtcttggttttaataagacgatgcaagcaaagaaaacacaagatttctctggtggttgg
agaatgaggatagcattagctcgggctttgtttatgaatccaaccattctgttactcgat
gaacccactaatcatcttgatttagaagcttgtgtctggttggaggagacattgaagaac
tttgatcgcatcttagttgtggtttcacactcccaggactttctgaatggtgtctgcaca
aatatcatccacatgcaaaacaggaaactgaagctttacactggtaattatgaccaatat
gttcaaacccgttcagaactggaagagaaccagatgaaacagtacaagtgggagcaggac
cagattgcttcaatgaaggagtatatagcccgatttgggcatgggtctgcgaaactagct
cgccaggctcagagcaaggaaaaaactctggccaaaatggaacgtggtggccttacagaa
aaagtggttagagacaagattcttgtctttcgcttcactgatgtgggaaagcttccccca
ccagtactgcagtttgtagaagtcacatttggctacactcctgataatctcatttacaag
aacattgactttggggtagacctggactcaaggattgctctggtgggacccaatggggct
gggaagagtactttgctgaagctcatgactggggatctgtttcctattgatggcatggtc
cggcggcacaaccacttgagaattgctcagttccatcagcacctgactgagaaacttgac
ttggaaatgtctgctctcctgtacatgatgagagagtacccaggaaatgaagaagagaag
atgagggcagcaatcgggaagtttgggctgacaggtaaggcacaggtgatgccaatgaag
aatctgtcagatggtcaaaggagccgggtgatttttgcatggttagcttataggcagcct
cacatgttgctgctggacgaaccaactaatcatttggatattgagacaattgactcacta
gctgaagcattgaatgagtgggatggtggtctggttcttgttagtcatgatttcaggctc
ataaaccaggtggctcaggagatatgggtgtgtgagaatcagaaggtgacccgctgggag
ggtgacattatggactttaagatgcatctgaagagcaaggctggattgtctgattga
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