KEGG   Vitis riparia (riverbank grape): 117915573
Entry
117915573         CDS       T07274                                 
Name
(RefSeq) splicing factor 3B subunit 6-like protein
  KO
K12833  pre-mRNA branch site protein p14
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117915573
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vri03041]
    117915573
Spliceosome [BR:vri03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    117915573
 Complex B
    117915573
 Complex C
   U2 SnRNP specific factors
    117915573
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_10 RRM_7 DUF1177
Other DBs
NCBI-GeneID: 117915573
NCBI-ProteinID: XP_034687054
LinkDB
Position
6:5885919..5886585
AA seq 125 aa
MATISLRKGNTRLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGTNKDTRGTA
FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDQKKKEDELAKMQEKYGVS
LNKDK
NT seq 378 nt   +upstreamnt  +downstreamnt
atggcgaccatctctcttcgaaaaggcaacacgcggctgccgccggaggtgaaccgagta
ctctacgtccgcaacctgccattcaacatctcaagtgaggagatgtacgacatcttcgga
aagtacggtgccatccgccagatccgaatcggcaccaacaaggacactcgcggcaccgcg
ttcgttgtctacgaggacatctatgacgccaagaccgccgtcgatcatctctctggcttc
aacgtcgccaatcggtacctcatcgttctctactatcagcaggccaagatgagcaagaag
ttcgatcagaagaagaaggaggacgagctcgccaagatgcaggagaagtacggcgtctcg
cttaacaaagataagtag

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