Vitis riparia (riverbank grape): 117915591
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Entry
117915591 CDS
T07274
Name
(RefSeq) paired amphipathic helix protein Sin3-like 4 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vri03036
]
117915591
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
117915591
REST complex
117915591
Heterochromatin formation proteins
Other heterochromatin formation proteins
117915591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
117915591
NCBI-ProteinID:
XP_034687079
LinkDB
All DBs
Position
1:complement(10905736..10920727)
Genome browser
AA seq
1451 aa
AA seq
DB search
MKRSRDDVYMGSQLKRPAVSSRGGEGSGQPQMMGGGTQKLTTNDALAYLKAVKDIFQDKR
DKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQP
PVKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVAALFHDH
PDLLVEFTHFLPDTSAASTQYAPSGRNPMHRERGSLVPPLRQILTDKKERITASHADRDL
SVDRPDTDHDRIIMRADNQRRGGEKEKERRDDRDRRERDDRDFDHDGNRDFNGMPRVPHK
RKVTRRVEDSVADQINQGGEGAENYGMRPMSSSYDDKNALKSMYNQEFVFCEKVKEKLRQ
SDSYQEFLKCLHIYSKEIITRTELQSLVGDLIGKYPDLMDEFNEFLTRCEKIDGFLAGVM
SKKSLWNEGHLPRSVKIEDRDRDRDRERDDRDKDRDRENRERDRLDKSGGFGNKDAVNQK
MSLFQNKEKYMAKPIQELDLSNCERCTPSYRLLPKNYPIPSASQRTELGAEVLNDYWVSV
TSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLDKINNNTIKTD
SPIRIEDYFTALNLRCIERLYGDHGLDVMDVLRKNATLALPVILTRLKQKQEEWARCRSD
FNKVWAEIYAKNYHKSLDHRSFYFKQQDSKSSSTKALLAEIKEISEKKRKEDDVLLAIAA
GNRRPIIPNLEFEYPDSDIHEDLYQLIKYSCGEVCTTEQLDKVMKIWTTFLEPMLGVPSR
PQGAEDSEDVVKTKSHAAKNGAASIGESDGSPGGGASATNTKQINSSRNGDETIPPEQSS
SCRVWMVNGDNGVKEDGSLDADRMPRKADTFCASTQQGKMQTSAAMADEMSGVSKQATCN
ERVTNSNASLASGAEQSHGRTNMENTSGLNATPSRASNTALEGALELRPSNEILPSSEVG
DCIRPTISTNGVMTEGVKAHRYHEESAGNSKIEREEGELSPNGDFEEDNFAVYGDAGVEG
KSKDTAASRQYQTRHGVEEICCGEAGGENDADADDEGEESAQRSSEDSENASENGDVSGS
ESGEGEECSREEHEEDGDHDEHDNKAESEGEAEGMADAHDVEGDGTLLPFSERFLLTVKP
LAKHVPPSLQDKEKNSRVFYGNDSFYVLFRLHQTLYERMQSAKLNSSSGERKWRASSDTN
STDLYARFMNALYNLLDGSSDNTKFEDDCRAIIGTQSYVLFTLDKLIYKLVKQLQTVATD
EMDNKLLQLYAYEKSRKPGRFVDMVYYENSRVLLHDENIYRIECSSAPTHLTIQLMDNGH
DKPEVTAVSMDPNFAAYLNSDFLSVVNEKKKSGIFLRRNKRKYARGDEFSVACQAMEGLQ
VVNGLECKIACSSSKVSYVLDTEDFLFRVRKKRKTSVRKSSCHDQAKSSNGCSVNGFTDC
FLPPNLPCCDS
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggtcaagagatgatgtttacatgggctcgcaactcaaacgccctgccgtctcg
tcgcgcggcggcgaagggtctggccagccccaaatgatgggaggaggtacccagaaacta
acaacaaacgatgccttagcttatctcaaggcggtgaaggacatatttcaagacaaaagg
gataagtatgatgattttcttgaagtcatgaaagatttcaaggctcaaagaattgacact
gcaggtgtcatagcaagggtgaaagagttatttaaggggcatagggatctaattttgggt
ttcaataccttcttgccaaagggatatgagatcaccctcccacttgaggatgaacagcct
ccagttaagaagcctgttgaatttgaagaagccatcaattttgtgaacaagattaagaca
cggtttcaaggagatgatcatgtttataagtcatttttagacattttgaacatgtatcgg
aaggaaaacaagtccatcactgaggtctaccaagaggttgctgcacttttccatgatcac
ccagacctgcttgtggagttcactcattttctgcccgatacttcagctgcctctactcaa
tatgcgccatctggtaggaatcctatgcaccgagagaggggctctctcgtacctccatta
cgacagattcttactgacaagaaggaaaggattactgcttcacatgctgaccgtgacctc
agtgtcgaccgtcctgacacagaccatgatagaataatcatgagagcagacaatcaacgg
aggggtggtgaaaaagaaaaggagaggagagatgacagagaccggagagagcgagatgat
agagactttgaccatgatggcaatagggactttaatggcatgccacgtgttccccacaaa
aggaaagttacccgcagagttgaagactctgttgctgaccaaataaaccaaggtggagaa
ggtgctgaaaactatggaatgcggccaatgtcatcttcttatgatgataaaaatgccttg
aaaagtatgtacaaccaggagtttgttttctgtgagaaagtgaaggagaaattacgacag
tctgatagctaccaggaatttttgaaatgccttcatatttatagcaaggaaataattact
cgaacagaattgcaatctctggttggagatttaattggaaagtatcctgatcttatggac
gagttcaatgaatttttgacccgttgtgagaagattgatggatttcttgctggtgttatg
agtaaaaaatccttgtggaatgaaggacatttacccagatcagtgaagatagaggatagg
gatagagatcgagatcgtgaaagggatgatagggacaaagatagagaccgggaaaataga
gagagggatagacttgataaaagtggaggctttggcaataaagatgcagttaatcaaaag
atgtctttgttccaaaacaaggagaagtatatggcaaagcccattcaagaacttgatctc
tctaactgtgagcgctgtactcccagttatcgacttcttccaaagaattatccaatacct
tctgcaagccagagaacagaacttggtgcagaagtgttgaatgactattgggtgtctgtc
acttcgggaagtgaggattattcttttaagcacatgcgcaaaaaccaatatgaagagagt
ctattccgatgtgaagatgacaggtttgaactggacatgctgttagagtctgtaaatgta
acaactaagcgtgtggaagaattgttagataagatcaacaataatactatcaaaacagat
agtccaattcgtattgaggactacttcacagctctgaatcttagatgcattgaacgttta
tatggtgaccatgggcttgatgtgatggacgtattgaggaagaatgcaactcttgctttg
ccagttatactaactcgcttgaaacagaaacaagaggagtgggctaggtgtcgttctgat
tttaataaagtttgggcagaaatttatgccaagaactatcacaaatctcttgatcatcgc
agcttctatttcaagcaacaggactcaaagagctcgagcacaaaggctttattggctgag
attaaagaaattagtgagaagaagcggaaggaggatgatgtgcttcttgctattgctgct
ggaaatagacgacctatcattccaaacttggaatttgagtaccctgattcagacattcat
gaagatttgtaccagcttatcaaatattcctgtggagaagtttgtacaactgaacagttg
gataaagttatgaaaatttggacaaccttcctggaacctatgcttggggttccttctcgg
ccccagggcgcagaggactctgaagatgttgtgaagactaagagtcatgctgccaagaat
ggtgctgcaagcattggagaaagtgacgggagtcctggtggtggtgcaagtgcgacaaac
accaaacagattaattcatctagaaatggagatgaaactattccacctgagcaatcaagt
tcttgcagggtttggatggtaaatggagataatggggttaaagaagatggttctcttgat
gcagaccgtatgccacgtaaggctgatactttttgtgctagtactcaacaagggaaaatg
cagaccagtgctgctatggctgatgaaatgtctggggtcagcaaacaagctacttgtaat
gaacgggtgaccaattcaaatgcctcccttgctagtggagcagagcagagtcatggaaga
accaacatggaaaatacgtcaggacttaatgctactccttccagagctagtaatactgct
cttgagggtgcgctcgaattgagaccaagtaatgaaattttaccttcatcagaggttggt
gattgtatcagaccaactatatctacaaatggtgtgatgacagaaggtgtcaaagctcac
agatatcatgaagaatctgctgggaactcaaaaattgaaagagaagagggtgagttatct
ccaaatggagattttgaggaggataattttgcagtctatggggatgccggtgttgaaggt
aaatcaaaggatactgctgcaagcaggcaatatcaaaccagacatggagtggaagaaata
tgttgtggagaagctgggggagaaaatgatgctgatgctgatgatgaaggtgaggaaagt
gctcagaggtcatcagaagacagtgagaacgcttctgagaatggtgatgtttcaggaagt
gaatcaggtgagggtgaggaatgctctcgtgaagagcatgaggaagatggggatcatgat
gagcatgataacaaggctgagagtgaaggtgaggctgaaggaatggctgatgcacatgat
gttgaaggagatggaacattgttaccattttcagaacgttttctactaactgtgaagcct
cttgcaaagcatgttcctccatctttacaggacaaagagaaaaactctcgggttttttat
ggaaatgattctttttatgtgctttttaggcttcatcaaacactgtatgagagaatgcag
tcagcaaagctcaattcatcttcaggtgaaaggaaatggagagcttcaagtgacacaaat
tctactgatttgtatgccagattcatgaatgcactttacaatttacttgatggttcttct
gacaatacaaaatttgaggatgattgccgagcaatcataggaactcagtcatatgttcta
tttacattagataagctgatatataaacttgtcaagcagctgcaaacagttgcaacagat
gagatggacaacaagctcctccaactttatgcatatgaaaaatcaagaaagcctgggaga
tttgtcgatatggtttattacgaaaactcccgtgttcttcttcatgacgagaacatttat
cgcattgagtgttcgtctgctcccactcatttgaccattcagcttatggacaatgggcat
gataagcctgaagtgactgctgtttccatggaccctaattttgcagcttatcttaacagt
gatttcctttcagttgttaatgaaaaaaagaaatctggaatttttttgaggagaaacaag
cgcaaatatgcacgaggagacgagttttctgttgcatgccaggccatggaaggacttcaa
gttgttaatggtcttgaatgtaagatagcatgcagttcatccaaggtatcgtatgtttta
gacacagaagatttcttgttccgagtgaggaagaaacggaaaacttcagtgaggaagagt
tcatgccatgaccaggcaaagtcttcaaatggctgttcagttaatggattcacagattgc
tttcttcctcctaatctgccctgctgtgactcttaa
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integrated database retrieval system
