Vitis riparia (riverbank grape): 117915618
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Entry
117915618 CDS
T07274
Name
(RefSeq) DNA topoisomerase 6 subunit B isoform X1
KO
K03167
DNA topoisomerase VI subunit B [EC:
5.6.2.2
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vri03032
]
117915618
Enzymes [BR:
vri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
117915618
DNA replication proteins [BR:
vri03032
]
Prokaryotic type
DNA Topoisomerases
117915618
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Topo-VIb_trans
HATPase_c
HATPase_c_3
Peptidase_S3
Motif
Other DBs
NCBI-GeneID:
117915618
NCBI-ProteinID:
XP_034687114
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All DBs
Position
6:complement(21072277..21080191)
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AA seq
673 aa
AA seq
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METGGSSESPTEPKKTKSKTARKPKENLLKQKSPAEFFAENKNIAGFDNPGKSLYTTVRE
LVENSLDSAESISELPEVEITIEEIGKSKFNSMIGLVDRERIDEELYDDFETAKAREKRL
AKEARTQELQAKNAALGKKVKEPQASKGMKGRGEASFYRVTCKDNGRGMPHDDIPNMFGR
VLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEISSSMKGQSYISFCRLDIDIHRNI
PHIHLHEKRDNKERWRGAEIQVVIEGNWTTYRSKILHYMRQMAVITPYAQFLFKFVSDTS
DKNVTIRFARRTDIMPPVPAETKYHPSAVDLLLIKRLISETSKENLLQFLQHEFVNIGKS
YAERLIGEMGPDFSPKMAVKSLTSQQIVRIHQLFRQAKFDDPSGDCLSPAGEYNLRLGII
KELHPDMVATYSGSAQVFEGHPFMVEAGVSIGGKDVKQGLNIFRFANRIPLLFEQGADVV
TRTALKRINWNSYKINQAQDKIGVFVSIVSTKIPFKGTGKEYIGDDISEIASAVKSSIQQ
CCIQLKSKIVKKIQARVQQERKRNLSKYIPDATGAIYDVLREMAQLHASKKKRYEDEDAD
VLRKVSTHSITKQTLSEKLAKHVEQVDYEMALEYATQSGVSEEPREAIYVQSLEDGKNFI
DFHSPVFAFRLYQ
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgggggtagcagtgaaagccctactgagccaaagaagaccaaatccaagaca
gctagaaagcccaaagaaaatcttctcaagcagaaatctcccgcggagttctttgcagag
aacaagaacattgctggatttgacaatccaggaaaaagtctttacacaactgtgagagaa
cttgttgaaaattcgcttgattctgcagaatccatctctgagcttcctgaagttgaaata
acaattgaagagatagggaagagcaagttcaattccatgattggtcttgttgatcgagaa
cgtattgatgaggagctgtatgatgattttgagacggctaaggctcgtgagaaacgacta
gccaaggaagctcgtactcaagaattacaagcaaaaaatgctgcccttgggaagaaagtt
aaagagccccaggcttccaagggcatgaagggtcgaggggaggcctcattttacagggtg
acttgtaaggacaatggaagaggaatgccacatgatgacatcccaaatatgtttggacga
gttttgtccgggacaaaatatggcttgaagcagacacgtggaaagtttgggctcggtgca
aagatggcattaatttggtctaagatgagtacaggacttcctatagagatttcatcatca
atgaagggccaaagttatatttcattctgccggctagatatagatattcatcggaatatc
cctcacattcatttacatgaaaaacgggataacaaggagcgatggcgtggtgctgaaatt
caagttgtcattgagggaaattggacgacttaccgttccaagatattgcattatatgcgt
caaatggctgttatcaccccttatgctcaatttctttttaaatttgtatcggatacatct
gataaaaatgtcaccataagatttgcacgaagaacagatataatgcctccagttcctgct
gagacaaagtaccatccatcagctgttgatttactactcattaaacgccttatttcagaa
acttcaaaagagaatcttttgcagtttcttcagcatgaatttgtaaatataggaaaatcc
tatgctgaacgtttgataggagaaatgggtccagattttagcccaaaaatggcagttaaa
tctctgacctctcagcaaattgttcgcatccaccagttgtttcgtcaggctaagtttgat
gaccctagtggtgattgtctcagtcctgcaggggaatacaatcttcgtcttggaattata
aaggagctgcatccagatatggtagcaacttattcaggcagtgctcaagtttttgaaggc
cacccattcatggttgaagccggagtcagtataggtggaaaagatgttaagcaaggtcta
aacattttccgatttgcaaaccggattcctcttctctttgagcaaggtgctgatgttgtt
accagaaccgccttgaaaagaatcaactggaatagttacaagatcaaccaggcacaagat
aaaattggtgtgtttgtgagcattgtaagcacaaaaatcccctttaaaggaacaggaaag
gaatatattggagatgatataagtgaaattgcttctgctgttaagtcttctattcagcag
tgctgcatccagctgaaatccaaaatagtgaagaaaattcaggctcgtgtgcagcaggaa
agaaaacgaaatttaagcaagtatattcctgatgctacaggtgctatatatgatgtctta
agagaaatggcacagttgcatgcatcaaagaagaaacgttatgaagatgaggatgcagat
gtactaaggaaagtttcaactcattcaattacaaaacagacactgagtgaaaaacttgct
aaacacgttgaacaggtagactacgagatggcgttggagtatgctacacagagtggagta
agcgaggaaccaagagaagctatatacgtacaatcactggaagatgggaagaacttcatt
gacttccatagccctgtctttgccttcagactctaccagtag
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