Vitis riparia (riverbank grape): 117915833
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Entry
117915833 CDS
T07274
Name
(RefSeq) E3 ubiquitin ligase PQT3-like isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117915833
Enzymes [BR:
vri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117915833
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
U-box type E3
117915833
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
TMP_2
zf-C3HC4
SHOCT
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
117915833
NCBI-ProteinID:
XP_034687437
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All DBs
Position
1:complement(9285031..9292961)
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AA seq
828 aa
AA seq
DB search
MAVYYKFKSAKDFDSIPIDGHFISIGNLKEKIFETKHLGRGTDFDLVVTNAQTNEEYLDE
AMLIPKNTSVLIRRVPGRPRMPIVTEKDEPKVENKVDEAQPTNSNFVGADSSAMKYPDDS
EWDEFGNDLYAIPEVVPVQSSNPVLDAPPPSKADEDSKIKALIDTPALDWQRQGTDGFGP
GRGFGRGIGGRMMGGRGFGRIGLERKTPPQGYICHRCKVPGHFIQHCPTNGDPTYDIKRV
KPPTGIPKSMLMATPDGSYALPSGAVAVLKPNEAAFEKEIEGLPSTRSVGELPPELHCPL
CKEVMKDAVLTSKCCFKSFCYKCIRDHIISKSMCVCGATNILADDLLPNKTLRDTINRIL
ESNNSSAENAGSALQVQDMESARCPQPKIPSPTLSAASKGEQMPPPQIEETLNIIKPVAD
ESKSANPPPQLPEKGRTGKAADVSEATLESMSVKELASQGSAPLAEEEVQQKLASGEAGK
KKKKKKARVPVNAADIQWKSTQDLAAENYMMPMDPTYAPYWNGMQPGMDGFMNPYAGAMP
YMGYGYNTLDMPFGGVLPQGPFGAPGYMLPVVPPQRDLADFGMGLNAAPPVMSREEFEAR
KADLRRRRESERRGESKEFPKDREYGREGSMGGDVSTMKPKPKLAPQSSSADHHHRRPRQ
ERSSPERPTRDVEAPRPSKRKSEHHHHRPSDSSARPPPSAAAESSRSLADRKAKPSVFSR
ISFPEEEPTKKRKLSETPSASAIPNGQHEDWKVSPSSAAASRKSSVTEYESSDEDRHFKR
KPSRYEPSPPAPAAKEAEWEEKEARHSSRGSREREREYDRDRGYNKHR
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgtattataaattcaaaagtgcaaaagattttgattcgattccaatcgacgga
cactttatatcaattggaaacttgaaagaaaaaatttttgaaacaaagcatctgggcagg
ggcactgatttcgacctcgtggtcaccaacgcccagactaacgaagagtatcttgatgaa
gcaatgttgatcccgaaaaatacctctgttttgattcgccgggttcctggacggcctcga
atgcccattgtgactgaaaaggacgagcctaaagtggaaaataaggtagatgaagctcaa
ccaacaaatagtaactttgtgggtgctgattcatctgccatgaaatatcctgatgattca
gagtgggatgaatttggaaatgacttatacgccatacctgaagtggtgccagttcagtca
agcaatccagttttggatgctcctcctccaagtaaagctgatgaagacagcaagatcaag
gctttaattgatactccagccttggactggcagcgtcaaggcactgatggctttggacct
ggaaggggttttggaaggggtattggtggaagaatgatgggtggacgtggttttggccgg
attgggttggagcggaaaacacctccacaaggatacatatgtcacaggtgcaaggtgcct
ggacatttcattcaacactgtcctacaaatggggatccgacttatgacatcaaaagagtg
aaaccccctactggcattccaaagtcaatgttaatggcaaccccagatggctcatatgcg
ttaccaagcggagctgttgctgttttgaaaccaaatgaagctgcttttgaaaaagaaatt
gaagggttaccttccactcgttctgttggtgaacttccacctgagcttcattgcccacta
tgtaaagaagtgatgaaagatgctgttctaacaagcaaatgttgtttcaagagtttttgt
tataaatgtatcagagaccacattatctcaaaatcaatgtgtgtttgcggtgccacaaat
atactcgcagatgatcttcttccaaacaaaacccttagggatacaatcaatcgcattctg
gagtctaacaatagtagtgcagaaaatgctggaagtgctttacaagttcaagatatggaa
tctgctcgctgcccacagcctaagattccatcccctacattgtctgccgcatcaaaggga
gagcagatgccaccacctcagattgaagaaactctgaacataataaaaccagttgcagat
gagagtaagtctgctaatcctccaccacagcttccagaaaaagggaggacaggaaaagct
gctgatgtgtctgaagctacacttgagtccatgagtgtgaaggaactggcttcacaggga
agtgctcctctggctgaggaagaagtgcagcagaagcttgcttctggtgaggcaggaaag
aaaaagaaaaagaagaaagctcgtgtgcctgtaaatgcagcagacattcagtggaagtcc
actcaagatcttgcagctgagaactatatgatgcctatggatcccacatacgctccttac
tggaatggcatgcagccaggaatggatggctttatgaacccttatgctggtgccatgcca
tatatggggtatggttacaatacattagatatgccttttgggggtgttctacctcagggg
ccttttggggcaccgggttatatgctgcctgttgttccacctcagagggatctggctgat
tttggaatgggtttaaatgctgcacctcctgttatgagcagggaggaatttgaggctagg
aaagctgatctgagaaggcgtcgtgaaagtgagagacgaggtgaaagcaaagagttccct
aaagatcgagaatatggtagagaagggagcatgggcggtgacgtttctacaatgaaacca
aaacccaaattggctccccaatcatcgagcgccgaccaccaccaccgccgccctcgacag
gagaggtcatcgccggagcgccccaccagagacgtagaggcaccgcgcccctccaagaga
aaatcagagcaccaccaccaccgcccctctgactcatccgcccgacctcctccctccgcg
gccgctgaatcatctagatccttggcggatcgcaaggcaaagcccagcgtcttctcccgc
ataagcttcccggaggaagagcccaccaagaagcgtaagttgtctgaaactccaagcgcc
tcggcgattccaaacggacaacatgaggattggaaagtgtcgccctcttcggcggctgcg
tcgagaaagagcagtgtgacagagtacgagtcaagtgatgaggataggcatttcaagaga
aagccatcgaggtacgagccgtcaccgccagccccggccgcgaaggaggcggagtgggag
gagaaggaggcgaggcattcttcgagggggtcgagggagcgcgagagagagtacgataga
gatcgtggttacaataagcacagataa
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