Vitis riparia (riverbank grape): 117916012
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Entry
117916012 CDS
T07274
Name
(RefSeq) pleiotropic drug resistance protein 2-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117916012
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vri02000
]
117916012
Transporters [BR:
vri02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
117916012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_16
AAA_29
AAA_33
Rad17
AAA_30
RsgA_GTPase
ABC_ATPase
DUF1440
DO-GTPase1
Motif
Other DBs
NCBI-GeneID:
117916012
NCBI-ProteinID:
XP_034687698
LinkDB
All DBs
Position
6:2481220..2488891
Genome browser
AA seq
1453 aa
AA seq
DB search
MAAALAGDDLSRSGSTASSSRSWRSASIREVWNAPDVFQRSSRQVADDEEELKWAAIERL
PTYDRMRKGMLKQVMSDGRIVQNEVDVSHLGAQDKRLLMESILKVVEDDNERFLTRLRDR
IDRVGIEIPKIEVRFQNLSIEGDGYVGTRALPTLLNSTLNAVEGVMGMIGLSPSKKRVVK
ILQEVSGIIRPSRMTLLLGPPASGKTTFLKALSGEPDDDLRMTGKITYCGHEFSEFVPQR
TCAYISQHDLHYGEMTVRETLNFSGRCLGVGTRYEMLVELSKREKEAGIKPDPEIDAFMK
ATAMAGQETSLITDYVLKILGLDICADIMVGDEMRRGISGGQKKRVTTGEMLVGPAKTFF
MDEISTGLDSSTTFQIVKFMKQMVHIMDITMVISLLQPPPETYDLFDDIILLSEGKIVYQ
GPRENVLEFFEHMGFRCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRHISVPEFAHSFD
SFHVGQRISEDIRVPYDKSRAHPAALVKEKYGISNWELFRACFSREWLLMKRSSFVYIFK
ATQLLIMGTIAMTVFLRTEMKYGQLEDATKFWGALFFSLINVMFNGVQELAMTVFRLPVF
FKQRDFLFYPAWAFAMPIWVLRIPISLIESGVWIGLTYYTIGFAPAASRFFKQFLAFFGV
HQMALSLFRFIAAVGRTPVAANTLGSFTLLIVFVLGGYVLARVDIQPWMIWGYYASPMMY
GQNAIAINEFLDERWNNPVTNSTDSVGVTLLKEKGLFSEEHWYWICVGALFAFSLLFNVL
FIAALSFFNSPGDTKSLLLEDNSDDNGRRQLISNNEGIDMAVRNAQAGSSSAIGAANNES
RKGMVLPFQPLPLAFNHVNYYVDMPAEMKSQGEEDRLQLLRDVSGAFRPGILTALVGVSG
AGKTTLMDVLAGRKTGGYIEGSISISGYPKNQATFARVSGYCEQNDIHSPYVTVYESLLY
SAWLRLASDVKDSTRKMFVEEVMDLVELHPLRHALVGLPGVDGLSTEQRKRLTIAVELVA
NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG
GQVIYAGPLGRQSHMLVEYFESVPGVTKIKEGYNPATWMLEVSTSAVEAQLDIDFAEVFA
NSALYRRIQDLINELSTPAPGSKDLYFPTQYSQSFVTQCKACFWKQRYSYWRNSEYNAIR
FFMTIVIGVLFGVIFWSKGDQIQKQQELVNLLGATYAAILFLGASNATAVQPVVAVERTV
FYRERAAGMYSELPYAFAQVAIETIYVAIQTLVYVLLLYSMIGFDWKVDKFFYFYYFIFM
CFTYFSLYGMMVVALTPGHQIAAIVSSFFFNFWNLFSGFLIPRPLIPIWWRWYYWASPVA
WTIYGIFASQVGDITTDLEITGSSPMPVNEFIKENLGFDHDFLVPVVFAHVGWVFLFFFV
FAYGIKFLNFQRR
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcactggccggggacgacctgtcgcggtcggggagcacggctagcagtagc
cggagctggcggtcagcgagtataagggaggtgtggaatgcgccggatgtgtttcagagg
agcagtcggcaggtggcagacgacgaggaggagctgaaatgggccgcgatcgagaggtta
ccgacctacgataggatgaggaaggggatgctgaagcaggtgatgagcgatggaagaatt
gttcagaatgaagttgatgttagtcatcttggagcccaagataagaggctgttgatggag
agtatcttgaaagttgttgaggatgataacgagaggtttctcacgaggctcagggacaga
atcgatagggtagggattgagattcctaagatagaagtgagattccagaatttgtcaatt
gaaggagatggatatgttgggactagagctcttccaactctgctcaattccactttgaat
gccgttgagggagtaatgggaatgattggactttctccatcgaaaaaaagggttgtcaag
atactccaagaggtaagtggaattatacggccatcaaggatgactctgcttcttgggcct
cctgcctctggaaaaacaacttttctaaaagcactttcaggggaaccagatgatgattta
aggatgactgggaaaatcacctactgtggtcatgaattcagcgaatttgtccctcagaga
acatgtgcttatataagccagcatgatcttcactatggggagatgacagtccgcgagaca
ttgaatttctcaggacgttgcttgggagttggaaccaggtatgaaatgctagtggagttg
tcaaaacgggagaaagaagcaggtataaaaccagatcctgagattgatgcattcatgaag
gccacagccatggctggccaagaaaccagtttgatcacagattatgttctcaagatactt
gggctggatatttgtgctgatattatggtgggagatgagatgagaaggggcatttctggt
ggacaaaagaagcgtgttactactggtgaaatgttagttggaccagcaaaaacatttttc
atggacgaaatatcaacagggctggacagttccacaacctttcagattgtcaaattcatg
aagcagatggtccatattatggacataaccatggtcatctctctcttgcaacctccacct
gaaacatatgatctttttgatgacattattcttctttcagaaggtaagattgtataccaa
ggcccacgtgagaatgttcttgaattctttgagcatatgggatttagatgcccagaaagg
aaaggggttgcggactttctgcaagaagtaacttccaagaaggatcaagaacaatactgg
tttagaaagaaccaaccttacaggcatatctcagtacctgagtttgcacatagcttcgac
tctttccatgttggccaacggatttcggaagatattagggttccttatgacaaatctaga
gcccatcctgcggctctggtgaaggaaaagtatggtatatccaactgggaactcttcaga
gcatgcttttcaagggaatggctgctgatgaagcggagttcttttgtatacatattcaag
gctacccagttattaatcatgggaacaatagccatgactgtgttcttgagaacagaaatg
aaatatggtcaattagaagatgcaacaaaattttggggagcactgtttttcagtctcatt
aatgtgatgtttaatggggtgcaagagcttgcaatgacagtattcaggcttcctgtgttc
tttaaacagagggatttcttgttctaccctgcatgggcttttgccatgccaatttgggtc
ctgcgaattcctatctcccttatagaatctggggtttggattggtcttacatattacacc
attggatttgctcctgctgccagtaggttcttcaaacagttcttagctttctttggtgtt
catcaaatggctctctctctcttccgtttcatcgcagccgttggaaggacaccagttgct
gcaaacacacttggtagctttaccttgctcattgtttttgtgcttggaggttatgtgctg
gccagagttgatattcagccatggatgatatggggctactatgcttcacccatgatgtat
ggacaaaatgcaattgccatcaatgaatttcttgatgagagatggaacaatcctgtcacc
aattccactgattcagttggagtaacacttctcaaggaaaaaggcctattttcagaggaa
cattggtattggatttgtgttggagcgcttttcgcattttctctccttttcaacgttctt
ttcattgctgcgctatcgtttttcaattctcctggtgatactaaatctctacttctggag
gacaactctgatgacaacggtaggaggcagttgatatccaataatgaaggtattgatatg
gctgtgagaaatgctcaagcgggttccagctcagctattggtgccgcaaacaatgaatct
agaaaaggaatggttctgcccttccagccccttccgcttgcattcaaccatgtgaattac
tatgtggatatgcctgctgaaatgaagagccaaggtgaagaggacaggctgcaactgcta
cgtgatgttagtggagctttcaggcctgggattctaacagcactagttggtgtgagtggt
gctgggaagaccactttgatggacgtgttagccggaaggaagactggtgggtacattgaa
ggaagcataagcatttctggttacccaaagaaccaagccacatttgctcgggtcagtggt
tactgtgaacagaatgacatccactcgccatatgtgacagtttatgaatctctcttgtac
tctgcctggctccgtcttgcttcggatgtaaaggattcaacacgaaagatgtttgttgaa
gaagttatggatttggtcgagctccatccattgaggcatgctctagttggacttccggga
gtagatggtctttcaacagaacagaggaagaggctcaccatagctgtagagttggttgct
aatccctccatcatatttatggatgagcccacatcaggccttgatgctagagctgctgca
atcgtgatgcgtactgtaaggaatacagtggataccgggcgaactgttgtatgtacaatt
caccaaccgagcattgatatttttgaagcatttgatgagcttctgttgatgaagagagga
ggacaagtgatttacgccggacctcttggtcgccagtctcacatgcttgttgaatatttt
gagtctgttccaggggttaccaagatcaaagagggttacaatccagctacctggatgcta
gaggtcagcacttcggcagttgaggcccaacttgacattgattttgcagaagtttttgcc
aactctgctctttatcggagaattcaggatcttattaatgaactaagcactccagcacca
gggtcaaaagatctttacttccccacacaatactcccaatcctttgtaactcaatgcaag
gcttgtttctggaagcagcgctactcttactggaggaactctgagtataatgctatccgc
ttcttcatgacgattgtcattggtgttttattcggtgtcatcttctggagcaaaggagat
cagatacagaaacaacaagaactggtcaatctactgggagctacctatgctgctattctt
ttccttggagcttcaaatgctactgcagtgcaacctgttgtggcagttgagaggacagta
ttctaccgtgaaagagcagcaggaatgtactcagagttgccttatgcatttgctcaggtg
gccatagagacaatttatgttgcaattcaaaccttggtttatgttcttcttctttactcc
atgattgggttcgattggaaagtggacaagttcttctatttctactacttcattttcatg
tgctttacctacttctcattgtacgggatgatggttgttgctctcactcccggccatcaa
attgctgctattgttagttccttcttctttaatttctggaacttgttctctggtttcctc
atccccaggccgctaatcccaatatggtggagatggtactactgggcttccccagttgct
tggacaatctacggcatttttgcatctcaagtgggtgacattacaactgatcttgaaata
actggaagcagtccaatgccagtgaatgaattcatcaaggaaaatttgggttttgatcat
gacttccttgtacctgtagtctttgctcatgtgggttgggtcttcctcttcttcttcgtg
tttgcctatggcatcaagttccttaacttccagaggagatag
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