Vitis riparia (riverbank grape): 117916015
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Entry
117916015 CDS
T07274
Name
(RefSeq) importin-5
KO
K20222
importin-5
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117916015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vri03009
]
117916015
Ribosome biogenesis [BR:
vri03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
117916015
Pre-60S particles
117916015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
Importin_rep_4
Importin_rep_6
HEAT
HEAT_2
MMS19_C
TOR1L1_N
Vac14_Fab1_bd
HEAT_EF3_N
IFRD
Cnd1
Htt_N-HEAT_1
Arm
Adaptin_N
DUF577
RIX1
HEAT_Maestro
HEAT_IPO9_c
TPR_TTI1_N
TPR_TNPO3_IPO13_3rd
DUF445
IBN_N
PUL
DUF1353
G1_gp67_C
Motif
Other DBs
NCBI-GeneID:
117916015
NCBI-ProteinID:
XP_034687703
LinkDB
All DBs
Position
6:22332292..22344965
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AA seq
1116 aa
AA seq
DB search
MDPESTQLQQAQLAAILGPDPGPFETLISHLMSTSNDQRSHAELLFNLCKQSDPNSLSLK
LAHLLQFSPHIEARAMAAILLRKQLTRDDSYLWPRLSASTQSSLKSILLGCIQREDAKSI
SKKLCDTVSELASSILPENGWPELLPFMFQCVTSDSAKLQEAAFLIFAQLAQYIGETLVP
HIKHLHSVFLQSLTSSSSSDVKIAALSAAINFIQCLSSSADRDRFQDLLPAMMRTLTEAL
NCGQEATAQEALELLIELAGTEPRFLRRQLVDVVGSMLQIAEAESLEEGTRHLAVEFVIT
LAEARERAPGMMRKLPQFISRLFAILMKMLLDIEDDPAWHSADSEDEDAGESSNYSVGQE
CLDRLAISLGGNTIVPVASELLPAYLAAPEWQKHHAALIALAQIAEGCSKVMIKNLEQVV
TMVLNTFQDPHPRVRWAAINAIGQLSTDLGPDLQVQYHQRVLPALAASMDDFQNPRVQAH
AASAVLNFSENCTPDILTPYLDGIVGKLLVLLQNGKQMVQEGALTALASVADSSQEHFQK
YYDAVMPYLKAILMNATDKSNRMLRAKAMECISLVGMAVGKDKFRDDAKQVMEVLMSLQG
SQMETDDPTTSYMLQAWARLCKCLGQDFLPYMSVVMPPLLQSAQLKPDVTITSADSDNEI
EESDDESMETITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIDQVAPTLVPL
LKFYFHEEVRKAAVSAMPELLRSAKLAVEKGLAQGRNESYVKQLSDYIIPALVEALHKEP
DTEICASMLDALNECLQISGRILDESQVRSIVDEIKQVITASSSRKRERAERTKAEDFDA
EEGELLKEENEQEEEVFDQVGEILGTLIKTFKASFLPFFDELASYLTPMWGKDKTAEERR
IAICIFDDVAEQCREAALKYYDTYLPFLLEACNDDNSDVRQAAVYGLGVCAEFGGAAFKP
LVGEALSRLNVVIRHPNALQPDNVMAYDNAVSALGKICQFHRDSIDSAQVVPAWLSCLPI
KGDLIEAKVVHDQLCSMVEMSDRELLGPNNQYLPQIVAVFAEVLCAGKDLATEQTISRMI
NLLRQLQQTLPPSTLASTWSSLQPQQQLALQSILSS
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggatcccgagtcgactcaactccagcaagctcaactagccgctatcctcggccccgat
ccagggcccttcgaaaccctaatctcccacctcatgtccacctccaatgaccagcgctcc
cacgccgaactccttttcaatctctgcaaacagtccgatccaaactcgctgtctttgaaa
ctcgcccatcttcttcagttctctcctcacatcgaggctcgagccatggccgcgattctc
ctcagaaagcaactgactcgggatgattcctacctctggccgcggctcagtgcgtccact
cagtcatcgctgaaatcaattttgttagggtgtattcagcgggaggatgcgaagagtatt
tcgaagaagctgtgcgacaccgtttcggagttggcgtcgtcgattctgccggagaacggg
tggccggagctgttgccgtttatgtttcagtgcgtgacctccgattcggcgaagcttcag
gaggcggcgttcttgattttcgcgcagttggcgcagtacatcggggaaaccctagttcct
catattaagcatctgcactcggtgtttttgcagagtctgacgtcgtcgtcgagctccgat
gtgaaaatagcggccttgagcgctgcgattaatttcattcagtgcttgtcgagttcggcg
gaccgggatcggtttcaggacttgttgccggcgatgatgcgcacgctaacagaggcgttg
aattgtgggcaggaggcgacggcgcaagaggcgctcgagttgttgatcgaattggccggg
acggagccgcggtttctgagacggcagttggtggatgtggtggggtctatgttacagatt
gcggaggctgagagcctggaggaggggacgcggcatttggcggtggagttcgtgataact
ctggcggaggcgagggagcgcgcacctgggatgatgaggaagttgccgcagtttataagt
aggctttttgctatattgatgaagatgctgttggatattgaggatgatccagcgtggcat
agtgcggatagcgaggacgaggatgcgggtgagagcagtaattacagtgttgggcaagag
tgtttggataggttagctatttcattgggtgggaatacgattgtacctgttgcttcagag
cttttgccggcatatttggctgcgccggagtggcaaaagcaccatgcagctctgattgct
cttgctcagatcgcagagggctgttcaaaggtaatgataaaaaatttggagcaagtggtg
acaatggttttgaatacattccaagatcctcatcctcgtgtccgatgggcagctattaat
gccattgggcaactgtccacagacttgggcccagatttgcaagttcagtaccatcaacga
gtgcttccagctctagctgcatctatggatgacttccagaatccacgggtgcaggcacat
gctgcttcagctgtgctcaacttcagtgagaactgcactccagatattttaacgccatat
ttagatggaattgttggcaaattactagtacttctacagaatggaaaacaaatggtgcaa
gagggggccttgactgctttagcatctgttgctgattcatctcaggaacatttccaaaaa
tactatgatgcagttatgccttatctaaaagcaatattgatgaatgcaactgacaagtct
aaccgcatgcttcgtgccaaagccatggagtgcatcagtttggttggcatggctgttgga
aaagataagttcagggatgatgcaaagcaggttatggaagtacttatgtcattgcaagga
tctcaaatggagacagatgacccaacaacaagctacatgctacaagcttgggccagactc
tgcaagtgcctgggacaagacttcctcccttacatgagtgttgtcatgccccctttgctt
caatctgctcaacttaaacctgatgtaaccattacatctgctgattcagacaatgaaatc
gaagaatctgatgatgaaagtatggagaccattactcttggggataaacgaatagggatc
aagactagtgtcctggaggagaaagccaccgcttgcaacatgctatgttgctatgccgat
gagttgaaggaagggttctttccatggattgatcaggttgctccaactttagttccactt
ctcaaattttatttccacgaagaagttaggaaagctgctgtttctgccatgccagagcta
ctgcgttcagcaaaattagctgtggagaaaggtctagctcaaggtcgtaatgagtcatat
gttaagcaattgtctgactatataataccagctttggtggaagctttgcataaggaacct
gatacagaaatatgcgcaagtatgctagatgcactaaatgaatgcttgcagatatctgga
cgaattctagatgaaagccaagtgagatctattgtggatgagataaaacaggtgattaca
gctagctcaagtagaaaaagagagagagcagagaggaccaaagctgaggactttgatgct
gaggagggagaattgctcaaagaagaaaatgagcaagaagaagaagtttttgatcaagtg
ggtgaaattttgggaactttgatcaagacattcaaggcatctttcttgccattctttgat
gagttagcttcatatctcacacctatgtggggcaaagataaaacagccgaagagagaagg
attgcaatctgcatctttgatgatgttgcagagcaatgtcgtgaagcggctcttaaatat
tatgatacatatcttcctttcctcttggaagcttgcaatgacgataattcagatgttcgg
caggcagctgtatacggacttggtgtttgtgcagaattcgggggtgctgcgtttaaacct
cttgttggagaggctctttcaaggctaaatgtcgtaatacggcatcctaatgcactgcaa
ccagataatgtaatggcatatgataatgctgtttctgctctaggaaaaatttgccagttt
catcgtgacagtattgattcagctcaggttgttcctgcctggttgagttgcttgccaata
aagggtgatttgatcgaggccaaagttgttcatgaccaactttgttcaatggttgaaatg
tcagatagggaacttctgggacctaacaatcaataccttcctcaaattgttgcagtattt
gctgaggttctatgtgcgggtaaggatcttgcaacagagcaaaccataagccggatgatt
aacttgctgagacaacttcagcagacgctaccaccttccaccttggcctcaacttggtca
tccttgcagccccagcagcagcttgcattacaatcaatcctctcatcttag
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