Vitis riparia (riverbank grape): 117916084
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Entry
117916084 CDS
T07274
Name
(RefSeq) ubiquitin-activating enzyme E1 1 isoform X1
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117916084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117916084
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vri04147
]
117916084
Enzymes [BR:
vri01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
117916084
Ubiquitin system [BR:
vri04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
117916084
Exosome [BR:
vri04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117916084
Exosomal proteins of other body fluids (saliva and urine)
117916084
Exosomal proteins of colorectal cancer cells
117916084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_E1_SCCH
ThiF
E1_FCCH
E1_4HB
E1_UFD
Motif
Other DBs
NCBI-GeneID:
117916084
NCBI-ProteinID:
XP_034687802
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Position
6:15158453..15170432
Genome browser
AA seq
1144 aa
AA seq
DB search
MTVLIRLGLGLGFLVLAPIIVGFVYDKSFDLYTLLNVFGLSMIWMGFCGVFSSLLHYMLP
RKRAVAGEVVDDDSDNTGTSSIKKHRISSSAAGTETTVNNNNSGSSLGNNSGNSNHSGGS
EVELQIMALGDGNPPDIDEDLHSRQLAVYGRETMRRLFASNVLVSGLQGLGAEIAKNLIL
AGVKSVTLHDEGTVELWDMSSNFIFSENDVGKNRALASVQKLQELNNAVVISTLTTKLTK
EDLSDFQAVVFTDINFEKAIEFNDYCHSHQPPIAFIKAEVRGLFGSVFCDFGPEFTVFDV
DGEEPHTGIIASISNDNPALVSCVDDERLEFQDGDLVVFSEVHGMTELNDGKPRKIKNAR
PYSFTLEEDTTNFGTYEKGGIVTQVKQPKVLNFKPLREALSDPGDFLLSDFSKFDRPPLL
HLAFQALDRFISELGRFPVAGSEEDAQKLIFISSNINESLGDGKLEDINPKLLRHFAFGA
RAVLNPMAAMFGGIVGQEVVKACSGKFHPLFQFFYFDSVESLPTEALDSSDFKPLNSRYD
AQISVFGSKLQKKLEDAVVFMVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSN
LSRQFLFRDWNIGQAKSTVAASAAQTINPCLHIEALQNRVGPETENVFNDAFWENLSVVI
NALDNVNARLYVDQRCLYFQKPLLESGTLGAKCNTQMVIPHLTENYGASRDPPERQAPMC
TVHSFPHNIDHCLTWARSEFEGLLEKTPAEVNAFLSNPTEYASAMRNAGDAQARDNLERV
LECLERERCETFQDCITWARLRFEDYFVNRVKQLIFTFPEDAATSTGAPFWSAPKRFPHP
LQFSAADPGHLYFVMAASILRAETFGIPIPDWAKQPKKLAEAVDKVIVPEFQPKTDVKIV
TDEKATSLSTASVDDAAVINELLAKIDQSWKSLPPGFRMNPIQFEKDDDTNYHMDLIAGL
ANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNT
FANLALPLFSMAEPVPPKVIKHRDMSWTVWDRWILKDNPTLRELLQWLKDKGLNAYSISC
GSCLLYNSMFPRHRERMDKKVVDLAREVAKVELPAYRSHLDVVVACEDDEDNDIDIPQVS
IYFG
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgttgatcagattagggttagggttagggtttttggttttggcaccgatcatt
gttggattcgtgtatgacaagtctttcgatctttatactttgttgaatgtgtttgggttg
tcgatgatttggatggggttttgtggggttttcagcagtttattgcactatatgcttcct
agaaagagagcagttgcaggagaggttgtagacgacgacagtgataacacaggtacttct
tcgatcaagaagcatcggatctcctcatcggccgccggcaccgaaaccacggtgaacaac
aataacagcggcagctctttgggcaataacagcggcaacagtaatcacagcggcggcagc
gaagttgaactgcaaattatggctttgggcgatggaaatccgccagatatcgatgaggat
ctgcatagccgccagcttgcagtgtacggccgggaaaccatgcggcggcttttcgcctcc
aacgtcctcgtctctgggcttcagggacttggtgctgaaatcgcaaagaacctcattctt
gctggcgtaaaatctgtgaccttgcatgatgaaggaaccgtggagttgtgggacatgtcc
agcaatttcatattttcagagaatgatgttggtaagaacagggcactggcttctgttcaa
aagttacaagagctgaataatgctgtggttatttctaccttaacgacaaaattgacgaaa
gaggatctttctgattttcaggctgttgtatttacggatatcaattttgagaaagctatc
gagttcaatgattattgccatagtcatcagcctcctatcgctttcatcaaggctgaagtt
agaggcctttttggttcagtgttttgtgacttcggtcctgaattcacagtttttgatgtt
gatggagaggaaccacacacgggtataattgcatccattagcaatgataatcctgcactg
gtgtcatgtgttgatgatgagaggcttgagtttcaggatggggatcttgttgtattctca
gaagtccatggaatgacagaactcaatgatggaaagccaagaaagataaaaaatgcaagg
ccgtattcgtttactcttgaggaggacaccacaaattttggtacctacgagaaaggtggt
attgtcacacaggtgaaacagcccaaggtcttgaactttaagccattgagagaagcactc
agtgatcctggtgattttcttctgagtgatttctccaagtttgatcgcccacccctccta
catctggcattccaagcgcttgacaggtttatatccgagttgggacgcttccctgttgct
ggttctgaggaggatgctcagaaactgatattcatatccagtaacatcaatgagagcttg
ggagatgggaaactagaagatattaatccaaaacttttgcggcactttgcttttggtgcc
agggcggtattgaatcccatggctgctatgtttggtggtattgtaggacaggaggttgtg
aaggcatgctctggaaagtttcatccactttttcagttcttctacttcgactcagtggag
tcacttcctacagaggcactggattccagtgatttcaaaccattgaatagccgatacgat
gcacagatttcggtgtttgggtctaagctacagaagaaactggaggatgctgtagtgttc
atggtaggatctggtgcgctaggttgtgagttcttaaaaaatgtagctctgatgggagtt
tcatgtggcaatcaagggaagctaacaattactgatgatgatgtgattgagaagagtaac
cttagtaggcagttcctcttccgtgattggaacattgggcaggccaaatccactgttgct
gcttctgctgctcaaacaataaatccttgtctccacattgaagctttgcaaaatcgtgtg
ggccctgagacagagaatgtgtttaatgatgccttttgggagaatttgagtgtcgttatc
aatgcactagacaatgtcaatgcgaggttgtatgttgatcagaggtgcttgtatttccag
aaaccactgcttgagtcgggaactctgggtgccaaatgcaacacacagatggtaattcct
cacctgacagagaattatggtgcctcaagagacccacctgagagacaagctcccatgtgc
acggtgcactctttcccacacaatattgaccactgcttgacatgggctcgatccgagttt
gagggtttgcttgagaaaacgccagcagaagtgaatgcatttttgtctaatccaactgaa
tatgcatctgcaatgaggaatgctggtgatgctcaagctagggataacctggaacgtgtt
ctcgaatgccttgagagagagagatgtgagacattccaggactgtatcacctgggcccgt
ctcaggtttgaagattattttgttaaccgtgttaagcagttgatttttacttttcctgag
gatgctgcaaccagcactggggctccattctggtcagctcccaagcgattccctcatcca
ttacagttctcagctgctgatcctggtcacctctattttgtcatggcggcatccattcta
cgggcagagacatttggcatcccaattcctgactgggccaagcaacctaagaagttggct
gaagctgttgataaggtgatagtgccagaatttcagccaaagactgatgtgaagattgtg
accgatgagaaggctactagcctttctactgcatctgtagatgatgcagcagtcatcaat
gaactacttgctaagatagaccagagctggaagagtctgccaccagggttcaggatgaac
ccaattcagtttgagaaggatgatgatacaaattaccatatggacctgatagctggtctt
gcaaacatgagggcgaggaactacagcattcctgaagttgacaaactgaaagccaagttc
attgctggaaggattatccctgcgattgcaacctccacagcaatggccacgggtcttgtc
tgccttgaactgtacaaggttttggatggagggcacaaactggaagactatcgcaacaca
tttgccaacctagccctcccacttttctccatggctgagccagtcccgcccaaagtcatc
aagcaccgggatatgagctggactgtttgggacaggtggatcctcaaagacaatccgact
ctaagggaacttctccaatggctcaaggacaaggggctgaatgcatatagcatctcatgt
ggaagttgcctgctctacaacagtatgttccctcgacacagggagcgaatggacaagaag
gtagtggatctggcccgggaagtggccaaggtggaactacctgcataccggtctcacttg
gatgttgtggtggcatgtgaggatgatgaggataatgatattgacattcctcaggtatca
atttacttcgggtag
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