Vitis riparia (riverbank grape): 117916103
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Entry
117916103 CDS
T07274
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117916103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vri03000
]
117916103
03021 Transcription machinery [BR:
vri03021
]
117916103
Transcription factors [BR:
vri03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
117916103
Transcription machinery [BR:
vri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117916103
RNA polymerase III system
TFIIIB
117916103
RNA polymerase I system
SL1/TIF-1B
117916103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
117916103
NCBI-ProteinID:
XP_034687841
LinkDB
All DBs
Position
6:complement(22709377..22715771)
Genome browser
AA seq
200 aa
AA seq
DB search
MADQVLEGSQPVDLSKHPSGIIPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIRDPKTTALIFASGKMVCTGAKSEHQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE
TYTAFENIYPVLTEFRKNQQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcaagttttggaagggagccaaccggtggatctctccaagcatccatctgga
atcatacccacgctccagaatattgtgtctacagtcaacttagattgcaaattggatctc
aaggccattgcattgcaagctcgaaatgcagaatacaatccaaagcgttttgctgccgta
atcatgaggataagggatccaaaaaccacggctttgatatttgcttctggaaagatggtt
tgtactggagccaagagtgaacatcagtccaagttggcagctcgaaagtatgctcgaatt
attcagaagctcggttttccagctaaatttaaggattttaagattcagaacatagttggc
tcctgtgatgttaaattccccataaggcttgaaggccttgcatattctcatggtgccttt
tccagctatgaaccagaattgttccctggcttgatctatcgaatgaaacaaccaaagatt
gtgctgcttatctttgtgtcagggaaaattgttctcactggagctaaggtgagagatgag
acatatacagcgtttgagaacatataccctgtccttactgagttccggaagaaccaacaa
tga
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integrated database retrieval system