KEGG   Vitis riparia (riverbank grape): 117916103
Entry
117916103         CDS       T07274                                 
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    117916103
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vri03000]
    117916103
   03021 Transcription machinery [BR:vri03021]
    117916103
Transcription factors [BR:vri03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    117916103
Transcription machinery [BR:vri03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     117916103
  RNA polymerase III system
    TFIIIB
     117916103
  RNA polymerase I system
    SL1/TIF-1B
     117916103
SSDB
Motif
Pfam: TBP DUF3378 DUF4295
Other DBs
NCBI-GeneID: 117916103
NCBI-ProteinID: XP_034687841
LinkDB
Position
6:complement(22709377..22715771)
AA seq 200 aa
MADQVLEGSQPVDLSKHPSGIIPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIRDPKTTALIFASGKMVCTGAKSEHQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE
TYTAFENIYPVLTEFRKNQQ
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcggatcaagttttggaagggagccaaccggtggatctctccaagcatccatctgga
atcatacccacgctccagaatattgtgtctacagtcaacttagattgcaaattggatctc
aaggccattgcattgcaagctcgaaatgcagaatacaatccaaagcgttttgctgccgta
atcatgaggataagggatccaaaaaccacggctttgatatttgcttctggaaagatggtt
tgtactggagccaagagtgaacatcagtccaagttggcagctcgaaagtatgctcgaatt
attcagaagctcggttttccagctaaatttaaggattttaagattcagaacatagttggc
tcctgtgatgttaaattccccataaggcttgaaggccttgcatattctcatggtgccttt
tccagctatgaaccagaattgttccctggcttgatctatcgaatgaaacaaccaaagatt
gtgctgcttatctttgtgtcagggaaaattgttctcactggagctaaggtgagagatgag
acatatacagcgtttgagaacatataccctgtccttactgagttccggaagaaccaacaa
tga

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