Vitis riparia (riverbank grape): 117916114
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Entry
117916114 CDS
T07274
Name
(RefSeq) nuclear transcription factor Y subunit A-1-like
KO
K08064
nuclear transcription factor Y, alpha
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vri03000
]
117916114
Transcription factors [BR:
vri03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
117916114
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CBFB_NFYA
Motif
Other DBs
NCBI-GeneID:
117916114
NCBI-ProteinID:
XP_034687863
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All DBs
Position
6:complement(20306472..20315774)
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AA seq
345 aa
AA seq
DB search
MQSNSKGPNQIGPPHTAPPSSVYSEPWWRGVGYNPISTTMTGGNTNNSPSSECPNGGSES
NDGQSHSNGGLNEEDDDSIKESQATASSQSNGNYGQEHQNLQHIAPNIQIGSSECLTQPP
QLELVGHSIACASNPYQDPYYGGMMTAYGPQPLVHPHLLGMHQARMPLPLEMTQDPVYVN
PKQYHGILRRRQSRAKAELEKKLIKVRKPYLHESRHQHALRRARSSGGRFAKKNAAEASK
HASEEKVTALGSAPSPQSVSSSGSERLPSDSTETWNSSSRQQEARGPQAHDTHEPPKYKN
GSGYYQSPGDSQTTNHSHTSERGEEDQQWKSFSADQGSQRPHAFQ
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcaaattccaaaggtccaaatcaaataggacccccacatacagctccaccttcc
tctgtttattctgaaccttggtggcgtggtgttgggtataaccccatttccacaactatg
acaggggggaatacaaacaattctccttcatctgaatgtccaaatggtggttcagaatcc
aatgatggtcagtcacattctaatggtggactgaatgaggaagatgatgatagtatcaaa
gaatcacaagctactgcatcctcacaatcaaatgggaactatggacaagaacatcagaat
ttgcagcatattgcacccaatatacagataggaagttctgaatgcctcacacagcctcca
cagcttgaacttgttggtcactcaattgcttgtgcgtcaaatccatatcaggatccatat
tatggggggatgatgacagcttatggacctcagcctttggttcatcctcatttacttgga
atgcatcaagctagaatgcctttaccccttgagatgacacaagatcctgtttatgttaat
ccaaagcagtaccatgggattttgaggcgaagacagtcccgtgccaaagcggaacttgaa
aaaaagttgataaaagtccgaaagccatatctgcacgaatccagacaccagcacgccctt
agaagggcaaggagtagtggaggccgttttgcaaaaaagaatgcagctgaagcttctaaa
cacgcttctgaagaaaaggtcacagctttaggctcagccccttcaccacaatctgtcagt
tcatcgggttcagagcggttgccgtctgactctactgaaacctggaattcctccagtaga
cagcaagaagcaagagggccccaagcacatgacacccatgaaccacccaaatataaaaat
ggcagcggctactaccaaagtcctggtgactcacagacaacaaatcattcacacactagt
gagagaggggaggaagaccagcaatggaaaagcttctctgctgaccagggttctcagagg
ccccatgccttccagtga
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