Vitis riparia (riverbank grape): 117916145
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Entry
117916145 CDS
T07274
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8 isoform X1
KO
K21343
ubiquitin carboxyl-terminal hydrolase 15 [EC:
3.4.19.12
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vri01002
]
117916145
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117916145
04121 Ubiquitin system [BR:
vri04121
]
117916145
Enzymes [BR:
vri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117916145
Peptidases and inhibitors [BR:
vri01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117916145
Membrane trafficking [BR:
vri04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
117916145
Ubiquitin system [BR:
vri04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117916145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
USP7_C2
DUSP
Motif
Other DBs
NCBI-GeneID:
117916145
NCBI-ProteinID:
XP_034687909
LinkDB
All DBs
Position
6:9606514..9645753
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AA seq
899 aa
AA seq
DB search
MDAPSEDLSDSTHPQNDDVRVYFVPYRWWKEAQDSNLADGNAKRGVLYSATSGSSYVGPM
KIINNIFNSDLVFNLRREEDSGHSNENGEVGVSGRDYALVPGDLWLQALKWHTDSRVATK
DGRTFSVMEDDMADVYPLLLRLSILRETNSLGVKITKKDNAVEFFRRACKIFSVESELLH
IWDFSGQTTLFFINDKNKLPKDCQRQSDQEILLELQVYGLSDSLRCREGKKDEMAAQHSN
LAGSSCGASLMMNGSLACMNSNSVHTNSPVFYGSSGEAGSLGLTGLQNLGNTCFMNSSLQ
CLAHTPKLVDYFLGDYSREINHENALGMDCLHFFVQSIIQYLLLGQGEIALAFGDLIRKL
WAPGATPVAPRMFKSKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKCKPYIEAKD
GEGRPDEEVADEYWRNHLARNDSIIVDVSQGQYRSTLVCPVCKKVSITFDPFMYLSLPLP
STTMRTMTLTVVSADGITQPSPCTITVPKNGKCEDLIQALSSSCYLKDDETLLVAEIYNN
RIIRYLEDPTDSLSLIRDGDRLVAYRLPKVTNEDRLVVFMHQRIDEQYIHGKLSSSWKAF
GIPLVARICNSVNGSDVYNLYLKLINPFQIRSEGVSNNSDSSEKTVIEEVKELKDAISPV
LSAGANGINETWVDPDSDAELQFYLTDDKGATRASKLVMDEPVTRLPRRLNLLVFWPEKK
IEQYDTRLISSLPEIFKSGFIARRPQESVSLYRCLEAFLKEEPLGPDDMWYCPGCKTHRQ
ASKKLDLWRLPEILVIHLKRFSYSRFMKNKLETYVDFPVDNLDLSTYITHKNGMVSNRYM
LYAVSNHYGSMGGGHYTAFVHHGGDQWYDFDDSHVSPIPEDKIKTSAAYVLFYRRVVDV
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggacgctccctcagaagatctctccgattccactcacccgcaaaatgacgatgttcgg
gtctacttcgttccctacaggtggtggaaggaggcccaggattcaaatttggccgatggc
aacgcgaagagaggggttttatactctgccacgtcgggttcatcgtatgttggtcccatg
aagatcataaacaacatatttaactcagatcttgtgtttaatcttaggagagaagaggat
tcagggcacagtaatgagaatggggaagtgggggtgtcagggagggactatgcattggtt
cctggagatttgtggttgcaggccctcaaatggcatactgattctagggttgcaacaaag
gatggtaggaccttttcagttatggaggatgacatggcagatgtttatcctttactactc
cggctctctattttgagagagacaaactcactgggagtaaaaataaccaaaaaggacaat
gcagtggagttcttcagaagagcctgcaaaattttcagtgttgagtctgagttgttacac
atttgggacttttctgggcagacgaccttgtttttcataaatgacaaaaataagttacca
aaagattgtcaacggcagtcagatcaggagattctcctggagttgcaagtttatgggtta
tcagattccttgaggtgcagagaagggaagaaagatgagatggcagcacagcactctaat
ttggccggttcctcttgtggtgcttcacttatgatgaatggtagccttgcctgtatgaac
tctaattctgttcacaccaattctccagtcttttatggaagctctggtgaagctggttct
ttgggcttgacgggattgcagaatcttggaaatacttgcttcatgaacagttccctccag
tgcttagcacacacaccaaagcttgttgactattttcttggagattatagtagagaaata
aatcatgaaaatgcattgggaatggattgtctgcatttttttgtgcagtcaattattcag
tatttacttcttggccagggtgagattgccttagcttttggagatttaataaggaagtta
tgggctcctggagcaactccagtggcaccaagaatgtttaagtcaaagcttgctcgtttc
gccccccaatttagtggatttaatcagcatgattcccaagagctccttgcttttctattg
gatgggctacatgaagatctcaatcgtgtaaaatgcaagccctatattgaagctaaggat
ggagagggtcggccagatgaagaagtggctgatgagtattggaggaatcatttggctcgc
aatgactctatcattgttgatgtgtctcagggacagtataggtcaacgctagtgtgtcct
gtttgcaaaaaggtctccattacgtttgatccattcatgtatctgtctctacctctacct
tcaacaacaatgaggacaatgactttgacagttgtgagtgctgatggaattactcagcca
tccccatgcaccattactgtgcccaagaatggaaagtgcgaggatcttattcaagcttta
agcagctcatgttatttaaaggatgatgagacactattagtagctgagatatataacaac
cggattatacgttatctggaggatccgactgattcattatctttgattagagatggtgat
cgactggttgcttatcgtttgccaaaggttactaatgaagaccgtttagttgtattcatg
caccaacggattgatgagcagtacatccatggaaagctgagttctagttggaaggcattt
gggattcctcttgtggcaaggatttgtaattctgttaatggatctgatgtctataacctg
tatctgaaattgattaatccattccaaataaggagtgaaggtgtcagcaacaattctgat
agcagtgaaaaaactgtgattgaagaagttaaggagctgaaagatgccataagtcctgtt
ttgagtgcaggtgcaaatggcatcaatgagacatgggttgacccagactctgatgctgaa
ttacagttctacttaacagatgataaaggcgcaactagggcctccaagctagtaatggat
gagccagtgacaaggttgcccaggcggttaaatctacttgtgttttggccagagaaaaaa
atagaacagtatgatacccgccttattagctcattacctgaaattttcaagtctggtttt
attgcaagaagacctcaagagtcagtctctctatatagatgccttgaagctttcttgaag
gaggagcctcttggaccagatgatatgtggtactgtcctggatgcaagactcaccgccaa
gccagtaaaaaattagatctttggagactgccagagatcctggttattcatttgaagagg
ttctcttacagccggtttatgaagaacaagctggagacatatgttgactttcctgttgat
aatcttgatttgtcaacatatataacccacaaaaatggcatggtatctaatcgttacatg
ctttatgcagttagtaatcactatggaagcatggggggtggtcattatactgcatttgtc
catcatgggggtgatcagtggtatgattttgatgatagccatgtttctcccatccctgag
gacaagataaagacttcagctgcttatgttcttttctaccggagagttgtagatgtatga
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