Vitis riparia (riverbank grape): 117916201
Help
Entry
117916201 CDS
T07274
Name
(RefSeq) carbamoyl-phosphate synthase large chain, chloroplastic
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00220
Arginine biosynthesis
vri00240
Pyrimidine metabolism
vri00250
Alanine, aspartate and glutamate metabolism
vri01100
Metabolic pathways
vri01110
Biosynthesis of secondary metabolites
vri01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
117916201
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
117916201
00220 Arginine biosynthesis
117916201
Enzymes [BR:
vri01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
117916201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_4
ATPgrasp_Ter
ATP-grasp_2
ATP-grasp_5
ATP-grasp_3
Epimerase
fvmYukDl_N
Motif
Other DBs
NCBI-GeneID:
117916201
NCBI-ProteinID:
XP_034688002
LinkDB
All DBs
Position
6:18841779..18847910
Genome browser
AA seq
1186 aa
AA seq
DB search
MGFCMNHPATFSGRSISSSLNPYSSNPTCFRIFFYPNQLRTGSRLVGLARLASRVRASPV
RAEKGVGSDSTNGTAAFGGAPAGKRTDLKKIMILGAGPIVIGQACEFDYSGTQACKALKE
EGYEVVLINSNPATIMTDPDMADKTYITPMTPELVEQVLEKERPDAILPTMGGQTALNLA
VALAESGVLEKYGVELIGAKLEAIKKAEDRELFKQAMENIGVKTPPSGIGTTLDECMEIA
NSIGEFPLIIRPAFTLGGTGGGIAYNREEFEAICKSGLAASLTSQVLVEKSLLGWKEYEL
EVMRDLADNVVIICSIENIDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSVAIIREIGVE
CGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPND
ITKKTPASFEPSIDYVVTKIPRFAFEKFPGSQPILTTQMKSVGESMALGRTFQESFQKAV
RSLECGYSGWGCAQLKEMDWDWEQLKYSLRVPNPDRIHAIYAAMKKGMKVDDIHELSFID
KWFLTQLKELVDVEQFLLSRSLSDLSKDDFYEVKRRGFSDKQIAFASKSTEKEVRLKRLS
LGVTPAYKRVDTCAAEFEANTPYMYSSYDFECESAPTQRKKVLILGGGPNRIGQGIEFDY
CCCHTSFALQKAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNTIDLERPDGIIV
QFGGQTPLKLALPIQNYLDEHRPLSASGVGHVRIWGTSPDSIDAAENRERFNAILNDLKI
EQPKGGIAKSEADALAIAMDIGYPVVVRPSYVLGGRAMEIVYSDDKLVTYLENAVEVDPE
RPVLIDRYLSDAIEIDVDALADSEGNVVIGGIMEHIEQAGVHSGDSACSLPTKTIPSSCL
DTIRSWTTILAKKLNVCGLMNCQYAITASGSVFLLEANPRASRTVPFVSKAIGHPLAKYA
SLVMSGKSLHDLCFTKEVIPRHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDFEFP
VAFAKAQIAAGQKLPVSGTVFLSLNDLTKPHLATIARSFSGLGFRIVSTSGTAHVLELEG
IPVERVLKMHEGRPHAGDMIANGQIQLMVITSSGDTHDQIDGRQLRRMALAYKVPIITTV
AGASASVEAIKSLKCCAIKMIALQDFFDIESEKESTKNVQSASSLL
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgggtttttgcatgaaccaccctgcaactttctccgggagatccatttcttcgtccttg
aacccgtattcgtccaaccccacatgtttccgtattttcttttacccgaaccagctccgg
actgggtcgcggcttgtgggtttggcgaggttggcgagccgggttcgagccagcccggtg
cgggctgagaagggtgttggtagtgattccacaaatgggacggcggctttcggcggagca
ccggcgggaaagaggacggatttgaagaaaattatgatacttggggcggggccgattgtg
attgggcaggcatgcgaattcgattactccggaactcaggcttgcaaggctttgaaggaa
gaaggatatgaggttgttctcataaattcgaacccagccacaatcatgactgacccagat
atggcagacaagacatacattactccaatgactcccgagttggtcgagcaggtgctcgag
aaggagaggcccgacgctatattgcccaccatgggtggccagaccgcgctaaacctcgcg
gtggcattagcggaaagtggggttttagagaagtatggcgttgagttgattggggcgaag
ctcgaggcgattaagaaagcagaggacagagagttgtttaagcaagcaatggaaaatatt
ggggtcaagacgccaccttcgggaattgggacaactcttgacgagtgtatggaaattgcg
aattcaattggggagtttccattgatcattaggcctgcgttcacgttgggcggaaccgga
ggtgggattgcttacaacagggaagagtttgaggcgatatgcaagtcggggcttgctgcc
agcttgacgtctcaggttttggttgagaagagcttgttggggtggaaggagtatgagctc
gaggtgatgagagacttggcggacaatgtggtcattatatgttccattgagaatattgat
ccaatgggggttcatactggggattctataactgtggcacctgctcagaccttgactgat
aaagagtatcagaggcttagggattactctgttgctatcataagggaaattggagttgaa
tgtggtggttctaacgtgcagtttgctgtcaatcctgttgatggggaggtgatggtgatt
gaaatgaacccaagagtgtcgaggtcctcagccttggcttctaaagccactggttttcct
atagcaaagatggctgcaaagttgtcggttggttactcattggatcagattccaaatgac
atcacaaagaaaacaccggctagttttgagccttccatagattatgtggtgacaaagata
ccccggtttgcatttgagaaattcccaggttctcaaccaatattgacgacccaaatgaaa
tctgtgggtgaatccatggctctaggccgaacattccaagaatcctttcagaaagcagtt
cgatcgcttgagtgtggctactctggatggggttgcgcacagctcaaggaaatggactgg
gattgggaacaattgaagtacagtctccgagtcccaaacccggatcgtatacatgccata
tatgctgcaatgaagaaggggatgaaagtggatgatattcatgagctgagtttcatagac
aaatggtttctcactcaacttaaagagctggtagatgtggaacaattcctcttgtctcgt
agcttatctgatctatcaaaggatgacttctatgaagtcaagcggagaggtttcagtgac
aagcagatagcttttgcatctaaatctaccgagaaagaagttcgattgaagcggttatct
ttgggtgtcactccagcctataagcgggttgatacctgtgctgcagagtttgaggctaat
actccctatatgtactcttcttatgattttgaatgtgaatcagctcccactcaaaggaag
aaggttttaattttaggtggaggaccaaaccggattggtcaaggtattgagtttgactac
tgctgctgtcatacatcctttgctctccagaaagcaggatatgagacaatcatgatgaat
tcaaatcctgaaacagtatctacagattacgatacaagtgatcgtctctactttgaaccg
ttgacagttgaagatgttctaaacaccatcgacttggaacgacctgatggcatcattgtg
cagttcggtggtcaaactcccttgaagttggctctacctatccagaattacttagacgag
cacaggcccctatctgccagcggggttgggcatgttcgcatttggggtacatcacctgat
tccattgatgcagctgagaacagagagaggttcaatgcaatccttaacgatctaaagatt
gaacagccaaaaggaggcattgccaagagcgaagctgatgctcttgccattgcaatggac
ataggctacccggttgttgtccggccttcctatgtgttgggtgggcgggcaatggagatt
gtgtatagcgatgacaagcttgtgacctaccttgaaaatgctgttgaggtggatcctgaa
cgtcctgtattgattgacagatatttatccgatgccattgagattgatgttgacgccctt
gctgactccgaaggtaatgtggtgattggtgggataatggagcacattgagcaggctggg
gtccattctggtgattctgcttgctcacttcccacgaagaccatcccttcttcatgcttg
gacacaattagatcatggactacaatattagcaaagaagctaaatgtgtgtgggctcatg
aactgtcaatatgcaatcacagcttctgggagtgttttcttgcttgaggctaaccctcgt
gcatcccgtacagtcccatttgtgtccaaggcaattggtcacccattggccaaatatgct
tcccttgtcatgtcagggaagtctcttcatgacctgtgtttcacaaaggaggtaatccca
agacatgtttcagtcaaggaagctgttcttccatttgagaaattccaaggatgcgatgta
ttgctaggtcccgaaatgcgtagcactggtgaggtaatgggtattgattttgagtttcct
gttgcatttgccaaagctcaaattgctgctggacagaagctaccagtttctggcactgtg
tttctcagcttgaatgacttaacaaagccccaccttgccacaattgcccggtcatttagt
ggccttggattcaggattgtttcaacttctgggacagcccatgttcttgaactggaaggt
atcccagttgagcgagttctgaagatgcatgaggggcggccacatgctggtgatatgatt
gctaacgggcagatccagctgatggtgatcacaagttcaggtgatacgcatgatcagatt
gatggacggcagctaaggcggatggctcttgcttacaaggttcctataataacaacagtt
gcaggagcatcggcaagtgttgaagcaattaagagcttgaagtgctgtgccatcaaaatg
attgctcttcaggacttctttgacattgaatcggaaaaggagagtactaaaaacgtgcag
tcggcgtcttcacttctttga
DBGET
integrated database retrieval system
