Vitis riparia (riverbank grape): 117916240
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Entry
117916240 CDS
T07274
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial-like
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00280
Valine, leucine and isoleucine degradation
vri00650
Butanoate metabolism
vri01100
Metabolic pathways
vri04146
Peroxisome
Module
vri_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
117916240
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
117916240
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117916240
Enzymes [BR:
vri01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
117916240
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Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
117916240
NCBI-ProteinID:
XP_034688075
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Position
6:6065047..6076693
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AA seq
432 aa
AA seq
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MSSLEEPLGLDKLASLSTIDLQRFSSNACRPRAEDMGMGSCWIDGRTCNSSNNCNEDYEG
YTRDAFQWKRQTRETSQGDSLKRRTSSQGRSCMVYGSSCDSWYSSDHQYGFQCNNKGVRG
MANKFLGGIPKFVKIVEVGPRDGLQNEKNIVPTAVKVELIHRLVSCGLPVVEATSFVSPK
WVPQLADAKDVMEAVRNLEGARLPVLTPNLKGFEAAIAAGAKEVAIFASASESFSKSNIN
CSIEESLTRYRAVALAAKKLSIPVRGYVSCVIGCPVEGAISPSKVAYVAKELYDMGCFEI
SLGDTIGVATPGAIVPMLEAVMAVVPVEKLAVHFHDTYGQSLPNILLSLQMGISTIDSSV
AGLGGCPYAKGASGNVATEDVVYMLNGLGVKTNVDLGKLMLVGDFISNRLGRPSGSKTAI
ALSRVNVDASKI
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtttggaagagccgcttggtcttgacaagttggcgagcctgagtaccattgat
ctccagaggttctcctctaatgcttgcaggcccagagcagaggatatggggatgggaagc
tgctggattgacgggaggacttgtaactcatccaataattgcaatgaagattatgaaggc
tatacaagagacgcattccaatggaaaagacaaacaagagaaacatcacaaggagactcc
ttgaaacgaaggacttcaagccagggcaggagttgcatggtgtatggaagcagttgtgat
tcatggtactcttcagatcaccaatatggcttccaatgcaataacaaaggtgtaaggggc
atggcaaataagtttttaggaggtataccaaagtttgtgaagatagtggaagttggtcca
agagatggattgcaaaatgagaagaatattgtacctacagctgtaaaagtggaactaatc
cataggctagtttcttgtggattgcctgttgttgaggctacaagttttgtgtcgccaaaa
tgggtacctcagttagcagatgcaaaggatgtaatggaagcagttcggaatttggagggt
gctagattacctgtgctgacacctaatttaaaaggatttgaagcagctattgcagctggt
gctaaggaagttgccatctttgcttcagcttctgagtccttttcaaagtcaaacatcaat
tgtagtattgaagagagtctcactcgctatcgtgctgttgcccttgctgctaaaaaactc
tcaattcctgtccgtgggtatgtgtcatgtgtcattgggtgtccggtggaaggagctatt
tctccctcaaaagttgcatatgtggccaaagaactttatgatatgggttgctttgaaatc
tcccttggtgatacaattggggttgctacgcctggcgccattgttcctatgcttgaagct
gtaatggctgttgttcctgttgagaagcttgctgtccacttccatgacacttatgggcag
tctcttccaaatattttactatcgctccagatggggattagcaccatagattcctctgtt
gctggtcttggaggatgcccatatgccaagggagcttcagggaacgtggccaccgaggat
gttgtttacatgcttaatggccttggcgtgaaaaccaacgtcgatctgggaaagctcatg
ttagttggtgatttcatcagcaaccgtttgggccgcccttctggttccaagacagccata
gcgttgagccgcgtgaatgttgatgcctctaagatttag
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