Vitis riparia (riverbank grape): 117916264
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Entry
117916264 CDS
T07274
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117916264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117916264
Enzymes [BR:
vri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117916264
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
117916264
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-RING_UBOX
FAIM1
Motif
Other DBs
NCBI-GeneID:
117916264
NCBI-ProteinID:
XP_034688105
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All DBs
Position
6:21770509..21774706
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AA seq
308 aa
AA seq
DB search
MAPGGGICKEVCESRSAFADYDVTTANLDLRSSPFRKATTGVGGKHGTPSTSGVHELLEC
PVCMDLMHPPIHQCPNGHTLCSNCKARVHNCCPTCRFELGNIRCLALEKIAESLELPCRY
QIFGCHDIFPYYSKLKHEQNCQFRPYSCPYAGAECSVTGDIPLLVMHLKDDHKVDMHDGC
TFNHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFHLGMAPVYMAFLRFMGDENEAR
KFSYSLEVGGYGRKLIWQGVPRSIRDSHKMVRDSQDGLIIQRKLALFFSGGERQQLKLKV
AGRIWKEQ
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggctccaggaggtggcatctgcaaggaagtttgtgagtcccgctctgcatttgcagac
tatgatgtaacaacagcaaatttggacctaagaagttctcctttcagaaaagcaactact
ggtgttggtggaaagcatggaacgccatcaactagtggtgtgcatgagctgttggaatgc
cctgtttgcatggatctaatgcaccctcctattcaccagtgtccaaatggccacacttta
tgttccaactgcaaggccagagtacacaactgttgcccaacttgtcgctttgagctaggg
aatataaggtgtttggctttggaaaaaattgcggaatcactggaacttccatgcagatac
caaattttcggttgtcatgacattttcccatattacagcaagctcaagcatgaacaaaac
tgccagtttcgcccatacagctgcccttatgctggggctgagtgttctgtcactggcgat
atcccgctccttgtcatgcacctcaaggatgatcacaaggttgatatgcatgatgggtgt
actttcaaccatagatatgtcaaatccaatccccaagaagtcgaaaatgccacatggatg
ctgactgttttcaactgttttggcaggcagttctgcttacactttgaggcattccatctg
ggaatggcacctgtttacatggcctttttgcggttcatgggcgacgaaaatgaagcaagg
aagttcagctatagtcttgaggtaggcggatatggcagaaagctaatatggcaaggagtt
cccaggagcattcgcgatagccataaaatggttcgggacagccaagatggactcattatt
cagagaaagttagcacttttcttctctggtggcgagaggcagcaactgaagctgaaggtg
gctggccgtatttggaaagagcagtga
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