Vitis riparia (riverbank grape): 117916300
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Entry
117916300 CDS
T07274
Name
(RefSeq) protein argonaute 5
KO
K11593
eukaryotic translation initiation factor 2C
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117916300
03036 Chromosome and associated proteins [BR:
vri03036
]
117916300
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117916300
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
117916300
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
117916300
microRNA pathway
RISC loading complex
117916300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
GSH_synthase
Motif
Other DBs
NCBI-GeneID:
117916300
NCBI-ProteinID:
XP_034688146
LinkDB
All DBs
Position
6:3202594..3212015
Genome browser
AA seq
1038 aa
AA seq
DB search
MSRRGGGGGRRSDSRRDQTSQAPGPSFNRGGEGGRGGEGGRGGEGGRGGGGGRGGGGGRG
GGGGRGRGYGAAAAGGSRPASEPHSPAAFPPLASPSPSASTSTASLSQKFDQSLTLQSPA
PVRRQPSDPVRPQPQPHPQPPPPVQAQPTPPVPTQPQASSSSQATGVEVPPSTSKAITFP
RRPGYGTVGRKCTVRANHFQVQVDDREFCHYDVTITPEVMSKTLNREIIKQLVDLYKVSH
LGKRSPAYDGSKSLYTAGPLPFTSKEFVVKLVKTDDGAGPRREREFKVAIKLASKGDLYQ
LQQFLCGRQLNAPQETIQILDVVLRASPSENYTVVGRSFFSTQLGRKGELGDGLEYWRGY
YQSLRPTQMGLSFNIDVSARSFYESILVTDFVAKHLKLRDVSRPLSDQDRIKVKKALKGV
KVQLTHREFAKRYKIAGVSSQPTNQLMFTLDDQATRVSVVQYFRQKYNIVLKYPSWPSLQ
AGSDSKPIYLPMEVCKIVEGQRYTRKLNERQVTALLRATCQRPSEREGNIQEMVRKNNFS
TDRVVRDEFGIRINEEPTLVDARVLPPPMLKYHDSGREAKVDPRVGQWNMIDKKMVNGGT
VQFWTCLNFSFRVQQDLPSGFCRELVNMCVSKGMVFNPNPLLPIQSAHPNQIEKALVDVH
KQSTAKLASMGQNGKQLQLLIIILPDVTGSYGKIKRICETELGIVSQCCQPSQASKLNKQ
YFENVALKINVKVGGRNTVLFDAIQRRIPLVSDLPTIIFGADVTHPQPGEDSSPSIAAVV
ASMDWPEVTKYRGLVSAQHHREEIIQDLYKTTADPHKGVTHGGMIRELLIAFRRSTGYKP
SRIIFYRDGVSEGQFSQVLLHEMDSIRKACASLEEGYLPPVTFVVVQKRHHTRFFPSDHR
SRDLTDRSGNILPGTVVDTKICHPTEFDFYLNSHAGIQGTSRPTHYHVLYDENKFTADIL
QILTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIEGDTSDSGSGSGDRSTRERNLE
VRLLPAVKENVKDVMFYC
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccgtggtggtggtggtgggcggagatcggattctcgccgcgatcagacgtct
caagctcctggtccatcgtttaacagaggcggggaaggagggagaggcggggaaggaggg
agaggcggggaaggagggaggggcgggggaggagggaggggcgggggaggagggagaggt
gggggaggagggagaggcaggggttatggcgccgctgctgccggtggttcaagacctgct
tcggagcctcactcgccggcggcttttccgccattggcttctccatcgccgtctgcttca
acctctacagcgtctctgagccaaaagttcgatcagagtctcacattgcagtctccggct
ccggttcgccgtcagccttctgatcctgttcgacctcagcctcagcctcatcctcagcct
ccccctccggttcaggctcagcctacgcctcctgttccgactcagcctcaggcttcgtct
tcatctcaggcaacaggggttgaggtgccgccttcgacgtcgaaggccattacgttccca
aggaggccgggatatggaacagtaggaagaaaatgtacggttcgagcaaatcattttcaa
gtacaagtggatgatagagaattctgtcattatgatgttacaataactcctgaggtaatg
tcaaagactctaaaccgggaaataataaagcaacttgttgacttatacaaggtgtcacat
ttgggtaaacgtagtccggcatatgatggcagtaagagcctgtatacagcaggtccattg
ccctttacttcaaaagagtttgtggttaagctagttaaaacagatgatggggctggtcca
agaagggagcgtgaatttaaggtggctattaaattggcttccaagggtgatttatatcag
ctacaacagtttttgtgtggcagacaactcaatgctccccaagagaccatacaaattctt
gatgtggttcttagagcatcaccatccgaaaattatactgttgtggggcggtcatttttc
tctactcaattggggagaaaaggtgagcttggtgatggcttagagtattggagaggctac
tatcaaagtcttcgcccaacccaaatgggactctcctttaatattgatgtgtcagcgaga
tctttctatgagtctattcttgtgactgactttgttgcaaaacatttgaagcttagagat
gtatcaagacctctgtctgatcaggaccgtattaaggtaaagaaagccttgaagggagtt
aaggtacaactcactcatagggagtttgctaaacgttacaaaattgctggtgtctcaagt
caaccaacgaaccaattgatgtttacccttgatgaccaggcaacaagagtgtcagttgtt
caatacttccgccaaaagtacaatattgtactcaaatacccctcttggccttctctccaa
gctgggagtgactcgaaacctatttatttacccatggaggtctgcaagattgttgagggc
caaagatatacaaggaaattgaatgaaaggcaggtaactgctctgttaagagcaacatgt
cagcgtcctagtgagagggaaggaaacattcaagagatggtcagaaaaaataatttcagc
acagatagagttgtaagggacgaatttggcattcgtataaatgaggaacctacattggtt
gatgcccgtgttttgccgcctccaatgcttaagtatcatgacagtgggcgagaagcaaag
gttgatccacgggtggggcagtggaacatgatagacaagaaaatggtaaacggtggaaca
gtgcaattctggacatgtttgaacttctcttttagagtacagcaagatttgccatctgga
ttctgtcgtgaattggtcaatatgtgtgtcagcaaaggaatggtattcaaccccaatcct
ttacttccaatacaatctgctcaccctaatcaaattgagaaggctctagtagacgttcac
aagcagtctacggcaaaacttgcaagcatgggacaaaatgggaaacaactccagctgctg
ataattattctacctgatgtaactgggtcatatggtaaaatcaaacgaatatgtgaaacg
gagttgggaattgtttcgcaatgctgtcagcctagccaagcttcaaaacttaataagcag
tattttgaaaatgttgcactgaagataaatgtgaaggttgggggccggaacactgtactt
tttgatgcaattcaaaggagaattcctctggtgagtgatcttccgacaataatctttggt
gccgatgttacccaccctcaaccaggggaagattctagcccatcaatagctgcggtggtg
gcttcaatggattggcctgaagttaccaagtacagggggctggtgtctgctcagcaccac
cgcgaagaaattattcaggatctctataaaacaactgcagatcctcataaaggtgtaact
catggaggcatgattagggaattgctaattgcctttcgcagatccactggctataagccc
agtagaatcatattctacagagatggtgtcagtgaaggtcaattcagtcaggttttgctg
catgaaatggattctataagaaaggcctgtgcatcactggaggaggggtatctaccacca
gttacatttgttgtggtgcagaaaaggcaccatacgcgctttttcccttcagatcataga
agtcgtgatttgacagataggagtggcaacattttaccaggtacggttgttgataccaag
atctgccaccctaccgagtttgatttttacctcaatagccatgctggaattcagggcacc
agcaggccaacacattatcatgtgttatatgatgagaacaagttcacggcagatatcttg
caaattcttacaaataatttgtgttacacgtatgcaaggtgcacccgctctgtctccata
gttccccctgcttattatgcccatttagcagccttccgggctcgatattatattgagggt
gatacatctgattctggatctggaagtggggacaggagtacaagggagaggaacctggag
gttcggctcctgcctgcagtcaaagaaaatgttaaagacgtgatgttttactgctga
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integrated database retrieval system
