KEGG   Vitis riparia (riverbank grape): 117916374
Entry
117916374         CDS       T07274                                 
Name
(RefSeq) serine/threonine-protein phosphatase PP1
  KO
K06269  serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    117916374
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:vri01009]
    117916374
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vri03021]
    117916374
   03019 Messenger RNA biogenesis [BR:vri03019]
    117916374
   03041 Spliceosome [BR:vri03041]
    117916374
Enzymes [BR:vri01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     117916374
Protein phosphatases and associated proteins [BR:vri01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    Catalytic subunits
     117916374
Transcription machinery [BR:vri03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     117916374
Messenger RNA biogenesis [BR:vri03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     117916374
Spliceosome [BR:vri03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    117916374
SSDB
Motif
Pfam: Metallophos STPPase_N
Other DBs
NCBI-GeneID: 117916374
NCBI-ProteinID: XP_034688227
LinkDB
Position
6:16573346..16581929
AA seq 301 aa
MAQMESGVLDDIIDRLMEFRQGKSGKQVPLMESEIRQLCTVSREIFLQQPNLLELEAPIK
ICGDIHGQYSDLLRLFDYGGYPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL
LRGNHECASINRIYGFYDECKRRFNVRLWKTFTDCFNCLPVAALIDDKILCMHGGLSPDL
TNLDQIRKLSRPTDVPDSGLLCDLLWSDPGRDIKGWGMNDRGVSFTFGPDKVSEFLNKHD
MDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDESLMCSFQILKPKF
M
NT seq 906 nt   +upstreamnt  +downstreamnt
atggcgcaaatggagagtggtgttttggatgatataattgacaggcttatggagtttcgg
caggggaagtcggggaagcaggttccgctgatggagtcggagatccgccagctctgtact
gtttccagagagatctttcttcagcagcctaatcttcttgagctggaggcaccaattaag
atctgcggtgatattcatgggcaatacagtgatcttttaaggctctttgactatggggga
tatcctcctgaagccaattatttatttctaggggactatgtggaccgtggaaaacagagt
ttggaaacaatatgccttctgcttgcttataaaattaaatacccagagaacttctttctc
ttaagaggaaatcatgagtgtgcttctattaacaggatttatggattctatgatgaatgt
aaacgtcggttcaatgttagactttggaagacgttcacagattgttttaattgtctccct
gtggctgctctgatagatgacaagatattgtgcatgcatggtggtctttcccctgaccta
acaaatttggatcaaattagaaaattgtcccgtccaactgatgttccagactctggtttg
ctttgtgatttactttggtcggatcctggtagagatatcaagggttggggaatgaatgac
aggggagtctctttcactttcggtccagataaagtttcagaattcttaaacaagcatgat
atggaccttatttgtcgtgcccaccaggttgtggaagatggatatgaattctttgcagac
agacagcttgttacaatattttctgctcccaactattgtggtgaatttgataatgctggt
gcaatgatgagtgttgatgaaagcttaatgtgctcttttcaaattcttaagccaaagttt
atgtga

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