Vitis riparia (riverbank grape): 117916412
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Entry
117916412 CDS
T07274
Name
(RefSeq) serine/threonine-protein phosphatase PP2A catalytic subunit isoform X1
KO
K04382
serine/threonine-protein phosphatase 2A catalytic subunit [EC:
3.1.3.16
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03015
mRNA surveillance pathway
vri04136
Autophagy - other
vri04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117916412
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
117916412
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117916412
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vri01009
]
117916412
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117916412
04131 Membrane trafficking [BR:
vri04131
]
117916412
03036 Chromosome and associated proteins [BR:
vri03036
]
117916412
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vri04147
]
117916412
Enzymes [BR:
vri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
117916412
Protein phosphatases and associated proteins [BR:
vri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Catalytic subunits
117916412
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
117916412
Membrane trafficking [BR:
vri04131
]
Autophagy
Other autophagy associated proteins
Others
117916412
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
117916412
Exosome [BR:
vri04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117916412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
YqzH
Motif
Other DBs
NCBI-GeneID:
117916412
NCBI-ProteinID:
XP_034688279
LinkDB
All DBs
Position
6:22071282..22081141
Genome browser
AA seq
314 aa
AA seq
DB search
MSFDPVPSSNNHGNLDEQISQLMQCKPLSEQEVRMLCEKAKEILMEESNVQPVKSPVTIC
GDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILR
GNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIE
TLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLK
LIARAHQLVMEGFNWGHEQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEPAPRR
GEPDVTRRTPDYFL
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgatccggttccctcgtcgaacaatcatggcaacctcgacgagcagatatcg
cagctgatgcagtgcaagccgttgtcggagcaggaggttaggatgctttgtgagaaggct
aaggagatattaatggaagaaagcaatgtccagcctgtgaaaagccctgtgacaatctgt
ggtgatatccatggccagtttcatgatctagcggagcttttccgaattggaggaaagtgt
ccagatacaaattacttgtttatgggagattatgtcgaccgtggttattattctgttgaa
actgtcacgctcctggtggccctaaaagtgcgctatcctcaacggattactattctaaga
ggaaatcatgaaagccgacagatcactcaagtttatgggttttacgatgaatgcctacga
aagtatggcaatgctaatgtttggaagatctttacagatttatttgattatttcccactg
acagcattggttgaatctgaaatattttgcctgcatggtgggttgtccccatctatcgag
acccttgataacatacgcaattttgaccgtgttcaagaagttcctcatgaggggcccatg
tgtgatcttttatggtctgacccagatgatcgctgtggttggggtatctcgcctaggggt
gctggatatacttttggccaggacatatctgaacaatttaatcacacaaacaacttgaag
ctgatcgctagagctcaccaactggttatggagggattcaactggggccatgagcaaaag
gtggttactatatttagtgcaccaaattattgttatcgctgtgggaacatggcttccatc
ctggaagttgatgattgcaagggccacacattcattcagtttgagccagcaccaaggagg
ggagagcctgatgtaactcggagaacacctgattacttcctatga
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integrated database retrieval system
