KEGG   Vitis riparia (riverbank grape): 117916534
Entry
117916534         CDS       T07274                                 
Name
(RefSeq) clathrin heavy chain 2
  KO
K04646  clathrin heavy chain
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri04142  Lysosome
vri04144  Endocytosis
vri05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:vri00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117916534
   04142 Lysosome
    117916534
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    117916534
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vri04131]
    117916534
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vri04147]
    117916534
Membrane trafficking [BR:vri04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    117916534
Exosome [BR:vri04147]
 Exosomal proteins
  Proteins found in most exosomes
   117916534
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_COPA_B Totivirus_coat
Other DBs
NCBI-GeneID: 117916534
NCBI-ProteinID: XP_034688507
LinkDB
Position
6:complement(15365576..15380876)
AA seq 1705 aa
MAAANAPISMKEALTLSSIGISPQFMTFTHVTMESDKYICVRETAPQNSVVIIDMSMPMQ
PLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIEMKAKMKSYQMPEQVVFWKWI
TPKMLGLVTQTSVFHWSIEGDSEPVKMFERTANLVNNQIINYRCDPSEKWLVLIGIAPGS
PERPQLVKGNMQLFSVDQQRSQALEAHAASFASFKVLGNENPSTLICFASKTTNAGQITS
KLHVIELGAQPGKPGFTKKQADLFFPPDFADDFPVSMQVSQKYGLIYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTAEASSIGGFYAINRRGQVLLATVNEATIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGLLRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRSDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYTELPDIKRVIVNTHAI
EPQALVEFFGTLSREWALECMKDLLLVNLRANLQIIVQTAKEYSEQLGVEACIKLFEQFK
SYEGLYFFLGSYLSSSEDPAIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMET
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDADLWEKVLSPDNEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGDVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIQSIERAVEFAFRVEEDAVWSQVAKAQLKEGLVSDAIE
SFIRADDATQFLDVIRAAENANVYHDLVRYLLMVRQKTKEPKVDSELIYAYAKIDRLGDI
EEFILMPNVANLQNVGDRLYDEALYEAAKIIFAFISNWAKLACTLVKLRQFQGAVDAARK
ANSSKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSDYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPEAWDHMQFKDVAVKVANVELYYKAVHFYLQEHPDLINDLLNVL
ALRVDHTRVVDIMRKAGHLHLVKPYMVAVQSTNVAAVNEALNGIYVEEEDYDRLRESIDM
HDNFDQIGLAQKVEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNLYKDAMETCSQSGD
RELAEELLVYFIEQKKKECFASCLFVCYDLIRPDVVLELAWMNNMIDFAFPYLLQFIREY
TGKVDDLVKDRIEALKETKAKEEEEKDVVKQQNMYAQLLPLALPAPPMPGMGGAGMGGGF
AAPPPMGGMGMPPMPPFGMPPMGSY
NT seq 5118 nt   +upstreamnt  +downstreamnt
atggcggccgcaaatgctccaatcagcatgaaggaggccttgacgttgtctagtatcgga
attagtccgcaattcatgacatttacgcatgtgaccatggagtcggataagtatatttgt
gttagggagacggcgccgcagaacagtgttgttatcatcgacatgagtatgcctatgcag
cctttgcggaggcctatcactgcagattcggctttgatgaaccccaattccagaattctt
gctctcaaagctcaactccctggaactactcaggatcatttacaaatattcaacattgaa
atgaaagcaaagatgaaatcatatcagatgcctgagcaggttgtcttttggaagtggatt
acccctaagatgctgggcctggttacacaaacatcagtatttcattggtccattgaaggt
gattctgagcctgtgaagatgtttgagcgaactgcaaatctggtaaataatcaaataatc
aactatcgttgcgatccttctgaaaagtggttggttttgattgggattgcacctggttca
cctgagaggccacaactcgtcaaagggaatatgcagcttttctcagtggatcagcaacgt
agtcaggcccttgaagcacatgctgcatcatttgcctcgtttaaagtattggggaatgag
aatccctcaacgctaatatgttttgcctcaaagaccaccaatgctggacaaattacatca
aagctacatgttattgaacttggggcccagccaggcaaacctggattcactaagaaacaa
gcagatctgttctttcctccggattttgcagatgactttcctgtgtcaatgcaggtatcc
caaaagtatggtttgatatatgtgataacaaagcttggacttctattcgtgtatgaccta
gagacggctactgcagtttacagaaaccgaattagtccagacccgatatttttgacagca
gaagcttcctcaattggaggtttttatgccattaataggcgagggcaggttttgcttgct
actgtaaatgaagcaacaattgtgccttttgttagtggccagttgaataacttggagctt
gccgttaatcttgccaaaagaggaaaccttcctggtgcagaaaacctggttgtccagcgg
ttccaagaactgtttgctcagacaaagtataaggaagctgcggagcttgctgcagaatct
ccacagggactcctgcgtactcctgatactgttgctaaatttcagagtgtccctgtgcaa
gctggacagacaccacctctgttgcagtactttggtactctgttaaccagaggaaaactc
aatgctttcgaatcactggaattgtcacgccttgttgtaaatcagaataaaaagaatctc
ttagagaattggttggcagaggacaagcttgaatgcagtgaggagcttggagatcttgtt
aagacggtggataatgaccttgcactgaaaatatatatcaaagctagggccactccaaaa
gttgttgcagcatttgctgagaggagggagttcgataaaattctaatatactccaagcag
gttggatatacgcctgattatttgttcctactccaaacaattttgcggtcagatccccag
ggggcagttaattttgctttaatgatgtctcaaatggaaggaggttgcccggttgattac
aatacaataacagatctattccttcagaggaatctgattcgtgaagcaacagcctttttg
ttggacgtactgaagccaaatttacctgagcatgggttccttcaaactaaggttttggaa
atcaatctggttacatttccaaatgtcgcagatgctatattagctaatggtatgtttagt
cactatgatcgcccacgtattgcacagctctgtgaaaaagctggtctttatgtgcgagcc
cttcagcattatactgaattgcctgatatcaaacgtgtcattgtgaacacacatgccatt
gagccacaggctcttgttgagttctttggaactctttcaagagaatgggctcttgagtgt
atgaaagaccttctacttgtcaatcttcgtgccaatcttcagataattgtgcagactgcc
aaggagtattctgaacagttgggtgttgaggcatgtataaaactgtttgagcagttcaag
tcttatgaaggattatactttttcttggggtcatatttgagctccagtgaggaccctgct
atccacttcaaatacattgaggcagctgctaaaactggacaaattaaggaggtcgaacgt
gtgactcgggaatcaaacttttatgatgccgagaagacaaagaattttctgatggaaacc
aagcttcctgatgcacgcccactgattaatgtctgtgatcgttttggttttgttccagat
ctcacccattacttatatactaataatatgctccggtatattgaaggttatgttcaaaag
gtaaatccgggaaatgctcctctagttgttgggcaacttctagatgatgaatgccctgaa
gatttcattaaaggtctcattctttcagttcggtctcttcttcctgttgagcccctcgtg
gaggaatgtgagaaaagaaatcgtctccgtttactcactcagttcttggagcatcttgtg
agtgagggtagccaggatgtgcatgttcataatgctctgggtaaaatcatcatagacagc
aacaacaatccagaacattttctcactactaacccatattatgattcacgtgttgtggga
aaatattgtgagaaaagggatcccactcttgcagttgttgcttaccgcagaggacagtgt
gatgatgaacttatcaatgttacaaataaaaactctttgttcaaactgcaggccagatat
gtggtggaaaggatggatgctgacctctgggagaaagttcttagtcccgataacgagtat
agaaggcaactaattgatcaagttgtatctactgctttgcctgaaagcaagagtccagag
caagtttcagcagctgttaaagcttttatgactgctgatcttccgcatgagcttattgag
cttcttgagaagattgtgcttcagaattctgcatttagtggaaactttaatcttcaaaat
ctgcttatccttacagctatcaaggctgatccatcacgagttatggattatattaataga
ctagacaactttgatggacctgctgttggggatgtggctgttgaagcacaattgtatgag
gaagcatttgccattttcaaaaagttcaacttgaatgttcaggctgtgaatgttctattg
gataacattcagagcattgaacgagctgtagagtttgcattccgtgttgaagaagatgct
gtctggagccaggtagctaaggcccagctaaaagaggggctagtgagtgatgcaattgaa
tcctttattcgtgcggacgatgccacccaattcttagatgtcatacgggctgctgagaat
gcaaatgtataccatgacttggtgaggtatctcctgatggttaggcagaaaaccaaagag
cccaaggtcgacagtgaactcatttatgcatatgctaagattgataggctgggtgacatt
gaggagttcattcttatgcctaatgttgctaatctccaaaatgttggtgatcgcttgtat
gatgaagccttatatgaggcagcaaagatcatatttgcatttatttctaactgggctaaa
ctggcttgtacgcttgtgaagctaagacaattccaaggtgcagttgatgcagctcggaaa
gccaacagctcaaaaacatggaaggaagtttgctttgcctgtgttgatgctgaggaattt
cgcttggctcagatatgtgggctcaacatcatcatacaggtggatgatttggaagaagtc
agtgactattaccagaacaggggatgctttaatgagctcatatctctcatggagagtgga
ttgggattggaacgtgcacatatgggcatctttactgagttgggtgtcctttatgccaga
tatcgtcctgagaagcttatggagcacattaaactattctcaacccgcctaaacattccc
aaactcatacgagcgtgtgatgagcagcagcactggaaggagcttacttatctgtatatt
caatatgatgagtttgacaatgctgcaaccaccataatgaaccactccccagaagcatgg
gatcacatgcaattcaaagatgttgcagtcaaagttgcaaatgtggagctctactacaag
gccgtgcacttctacctgcaggaacatcctgatcttattaatgatctccttaatgtgctt
gctcttcgtgtggaccacactcgggttgttgacataatgcgaaaggctggtcaccttcat
cttgtgaagccctatatggttgctgttcagagtactaatgtggctgcggtaaatgaagca
ttaaatggtatttatgtagaggaggaggactatgatagacttcgggaatcaatagatatg
catgataactttgaccagataggccttgcacagaaggttgagaaacatgagcttctggag
atgaggcgtattgctgcttatatttataagaaagcaggtagatggaaacaatccattgca
ttgtcaaagaaagataacctatacaaagatgcgatggagacatgctctcagtctggggat
cgtgaacttgcagaggagttgcttgtttatttcattgagcagaaaaagaaagagtgtttt
gcatcatgcctctttgtctgttacgatttaattcggccagacgttgtccttgagcttgca
tggatgaacaatatgatcgactttgccttcccatatctcttacagtttattcgtgagtac
acgggcaaagtagatgaccttgtcaaggacagaattgaggctcttaaagagacaaaagct
aaagaggaggaggagaaggatgttgtgaaacaacagaatatgtatgcacagttactgcct
cttgctttgcccgctccaccaatgccaggaatgggtggtgcagggatgggcggtggtttt
gctgctccaccaccaatgggcgggatgggaatgcctccaatgccacctttcggcatgcca
ccaatgggctcctattga

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