Vitis riparia (riverbank grape): 117916604
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Entry
117916604 CDS
T07274
Name
(RefSeq) zinc finger protein BALDIBIS-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vri03000
]
117916604
Transcription factors [BR:
vri03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
117916604
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-met
zf-C2H2_4
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
117916604
NCBI-ProteinID:
XP_034688612
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Position
6:19221147..19224012
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AA seq
527 aa
AA seq
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MMAEDGLTLPSSIRGFVQEPNSNPNPNPSANPVKKKRNLPGTPDPEAEVIALSPKSLMAT
NRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRTSKEVRKKVYICPEKSCVHHNPTRAL
GDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRKDSF
ITHRAFCDALAEESARLTSVSAPNPIFRNELMNGSISNPQAHIIPQFSSVFRPEFVGSEQ
LVGHLNADGQKPRLPLWLDHSNSHLNNPIGVNTNGSFLAPTSAGLPEMVQTAPMSMYGSP
ASSQNQWLQRCSEASFTSSTLPRVLKEEEENKGNLSESITSLFSSNQNQQESSAHMSATA
LLQKAAQMGSTKSNSAFFGNTGFGSINSSLSNATPFSSYPHGRSNNQVHKFLIRQSNQSD
SMNQLINSTSPSSTMGDGLLMGDMNSTPLVDTAKNNMDHFLMVPSNPKQTQQIAGKFHAS
SNEVERGLTRDFLGVGSDASRPFLQQELAKFASMGSAMGMSQYSGNH
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgaagatgggctcacacttccctcttccatcagaggttttgttcaagaacca
aattcaaaccctaaccctaaccctagtgcaaatccagtgaagaagaagagaaatttacca
ggaacgccagatccagaagcagaagtcatcgctctatcaccaaaatcactcatggccacg
aaccgattcatctgtgaaatctgcaacaagggtttccagagagaccagaacttgcagctt
cacaggcgaggccacaatcttccatggaagctccggcaaagaacaagcaaggaggtccgg
aagaaggtgtacatatgcccggaaaagtcctgtgtgcaccacaatccaaccagggcccta
ggagacctcaccggaataaagaagcattacagtagaaaacacggtgagaagaagtggaag
tgcgagaaatgttccaagaaatatgcagttcagtcagattggaaagctcatagtaaaatt
tgtggcaccagagagtacaaatgcgactgtggaactctcttctccaggaaggacagcttc
atcacccacagggccttctgtgatgctttagctgaggaaagtgccaggctcacttcagtt
tcagcaccgaatccaatcttcagaaatgagttgatgaatgggagcattagtaacccacaa
gcccacataatcccccaattttcctcagtttttcgacctgaatttgtgggctcggagcag
ctggttgggcatctcaatgcagatgggcagaaaccaaggttgccactgtggctggaccat
tccaattcccacctcaacaaccccattggggttaacactaatggttcctttttggcaccg
acatccgctgggttgcctgaaatggtgcaaacagcgcccatgagtatgtatggatcaccg
gcatcatcacagaatcagtggctccaaaggtgttcagaagcgtcatttacttcatccaca
ttgccacgggtgttaaaggaggaggaagagaacaaaggaaatttgtctgagagcataact
tccttgttctcaagtaatcagaatcaacaagaaagctcggctcacatgtcagcaaccgca
ctcttgcagaaagctgcccaaatggggtctacaaagagcaactcagccttcttcggtaat
acaggattcggttccatcaactcatccctctccaatgctacgcccttcagctcttatccc
catggcagaagcaacaaccaagtccacaagtttcttatcaggcagtcaaaccaatccgac
agcatgaaccaactcatcaactcaacatcaccctcctccaccatgggagatggactgctg
atgggtgatatgaactcaaccccattagtggacactgccaagaacaacatggaccatttt
ctgatggtcccatcaaatcccaagcaaacccaacagattgctgggaagttccatgcaagt
tccaatgaagttgaacgcggtctaaccagagattttctgggtgtgggaagtgatgcaagc
agacccttcttgcaacaagagctggctaagtttgcttcaatgggttcagccatgggcatg
agccaatacagtggaaaccactga
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