Vitis riparia (riverbank grape): 117916606
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Entry
117916606 CDS
T07274
Name
(RefSeq) phytoene synthase 2, chloroplastic-like
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00906
Carotenoid biosynthesis
vri01100
Metabolic pathways
vri01110
Biosynthesis of secondary metabolites
Module
vri_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
117916606
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
vri01006
]
117916606
Enzymes [BR:
vri01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
117916606
Prenyltransferases [BR:
vri01006
]
Terpene biosynthesis
Squalene/phytoene synthase
117916606
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HTH_25
Motif
Other DBs
NCBI-GeneID:
117916606
NCBI-ProteinID:
XP_034688615
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Position
6:complement(22106548..22110168)
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AA seq
404 aa
AA seq
DB search
MKESWYIFCKGNTLLYILKIISIVKPSVAWSNGKLLSRKSTRRAARAEVIVAPKKRTSSH
NVPELSKQGIPHTDLHVREIVKRQSTDKSAMFDVCQKPQFHPMFLEEAYERCRNICAEYA
KTFYLGTLLMTEERQKAIWAIYVWCRRTDELVDGPNAAYMSSAVLDRWEERLHDIFNGRP
YDMLDAALTDTIFKFPLDIKPFGDMIEGMRMDTKNFRYANFQELYLYCYYVAGTVGLMSV
PVMGIAPESPVSAQSIYNSALYLGIGNQLTNILRDVGEDSLRGRVYLPQDELAQFGLCDR
DIFSRKVSDGWREFMKQQITRARFYFNQAEEGASQLDKASRWPVWSSLLLYRKILDAIEE
NDYDNLTKRAYVGRTKKLLMLPLAYSRAQSATHLGLSGTKFLGF
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagagttggtacatattctgtaaaggaaacacactgctgtatatattgaagata
atatctatagttaagcctagtgttgcatggagcaatggcaaactcctgtcccgcaaatct
acaaggagagcagctagagcagaagttattgttgctcccaagaaaagaacgagtagccac
aatgtccctgaattatcaaagcaaggcattcctcatactgatctacatgtacgagaaatt
gtcaagaggcaatctactgacaagtcagccatgtttgatgtgtgtcaaaaaccacagttt
catcctatgtttcttgaagaagcttatgaaaggtgcaggaacatttgtgcagaatatgcc
aagaccttttatctaggaactctgttaatgacagaggagcgacagaaagctatatgggct
atatacgtttggtgcaggaggactgatgaacttgtggatggccccaatgctgcctacatg
agctctgcagttcttgatagatgggaagagaggctgcacgacatcttcaatggacgcccc
tatgacatgcttgatgctgcactaactgataccattttcaagttccccctagatattaag
cccttcggggacatgatagagggcatgagaatggataccaaaaattttcgctatgcaaat
tttcaagagctctacctttactgctactatgtggctggaaccgtcggcctaatgagtgtc
ccagtaatgggaattgcaccagagtctccggtttctgctcaatccatctataattcagca
ctctacttaggcataggaaatcaactaacaaacattctcagagatgttggagaagattcc
ctgagagggagagtatatctcccccaagacgagcttgcacagtttgggctctgtgacagg
gacattttctcgagaaaagtcagtgatggatggagggagttcatgaaacagcagataaca
agagcaagattctacttcaaccaggcggaggagggagcttctcagctagacaaggctagt
cgttggccggtatggtcatcattactgttatatcgcaagatcttggatgccattgaagag
aacgattatgacaacttgacaaagcgggcatacgttgggaggacaaagaagcttctcatg
ctgccattagcatactccagagctcagtcagccacccaccttggcctttcaggaaccaag
tttttgggcttttaa
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