Vitis riparia (riverbank grape): 117916708
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Entry
117916708 CDS
T07274
Name
(RefSeq) lysine--tRNA ligase, chloroplastic/mitochondrial
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117916708
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vri01007
]
117916708
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vri03016
]
117916708
Enzymes [BR:
vri01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
117916708
Amino acid related enzymes [BR:
vri01007
]
Aminoacyl-tRNA synthetase
Class II (A)
117916708
Transfer RNA biogenesis [BR:
vri03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
117916708
Prokaryotic type
Other AARSs
117916708
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GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Phage_SSB
Motif
Other DBs
NCBI-GeneID:
117916708
NCBI-ProteinID:
XP_034688745
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Position
6:22497741..22510219
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AA seq
592 aa
AA seq
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MEAWKVWSASSQPLKQLIHLASSTTRRTSSRFIVSCCSPSTTTATTAGGGSRIAGRNRRS
ASSSSSSTSDRDAIRAIRLKKVEELRNKGLEPYAYKWDRTHTANQLQDIYRHLGNGEELN
SESDYVSIAGRIVARRAFGKLAFFTLRDDSGTIQLYCEKERLLNEQFEQLKTLVDIGDIL
GVSGSIKRTEKGELSVYVNSFAILTKSLLPLPDKYHGLTDVDKRYRQRYVDMIANPEVAD
IFRKRAKIVSAIRRTVESSGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATEL
HLKRMLVGGFEKVYEMGRIFRNEGISTRHNPEFTTIEMYEAYSDYESMMNMAEEIVTQCA
LAVCGKLTIDYQGTEICLERPWRRETMLNLVKEATGIDFNELGNDIKVAKEVALRALGIG
HDSKDKSSIEACTSVGHVLNEVFEIVVEPQLIQPTFVLDYPIEISPLAKPHRRQAGLTER
FELFICGRELANAFSELTDPMDQRGRLEEQVRQHNEKRAAVVSEPDHAEEKTTESEDESY
EVTLDDDFLTALEYGMPPASGMGLGVDRLVMLLTNSASIRDVIAFPVLKVQQ
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgtggaaggtgtggagcgcttcatcgcagccgctgaagcaactcatccacttg
gcttcttctaccactcgccgcacctcttccagattcatcgtctcatgctgttctccttcc
accaccaccgccaccaccgccggcggcgggtccaggattgccggccggaatcggaggtca
gcgtcttcgtcttcctcgtccacctccgacagagacgccattcgtgccattcgtctgaag
aaggttgaagaattgaggaacaaggggcttgagccctatgcttataagtgggataggact
catactgctaatcagttgcaagatatatatagacatctagggaatggggaagagttaaac
agtgagagtgattatgtgtcaatagcaggaagaattgtggcacgtagagcatttggaaag
cttgccttcttcactttgagagatgattcggggacaatccagctttactgcgagaaggaa
aggcttttaaatgagcaatttgagcagttaaagacacttgttgatattggtgatattctg
ggtgtaagtggctcaataaagcggacagagaaaggagagctctctgtttatgtgaattcg
tttgcaattcttacaaaatctctactcccactgccagataaatatcatggtctaactgat
gtggataagcgttatcgccaaaggtatgtagacatgattgctaatcctgaagtagctgat
atatttcggaaaagagcaaagattgtatcagcgatacgcagaacagtggaatcatcaggc
tttgttgaagtcgaaactccagtcctacagggagcagctggtggagcagaagctaggcca
tttgtcacataccataattcacttggaagggatctttacttgaggattgcaactgagctg
catttaaagagaatgctggtagggggatttgaaaaagtatatgagatgggtcgaatattc
agaaatgaaggcatttcaactcgtcataatcctgagtttaccactatagagatgtatgaa
gcatattcagactatgaaagcatgatgaacatggcagaggaaattgtaactcaatgtgct
cttgcagtttgtgggaagcttaccattgattaccagggaacggagatatgtctagaacga
ccttggagaagagaaaccatgctcaatcttgtgaaagaggccactgggattgacttcaat
gagttgggcaatgatattaaagttgctaaggaagttgctctgagagcactagggattggt
catgatagtaaagacaaatcttctattgaagcctgcacatctgttggccatgttcttaat
gaggtctttgagattgttgtagaaccacagctcatacaacccacgtttgtcttggattat
cctattgagatatctcctctagccaaaccacatcgaaggcaggcaggcttgactgagaga
tttgaactattcatttgtggtcgtgaactggccaatgcattctctgaattgactgatcct
atggatcagagaggacgcttggaggagcaagtgaggcagcataatgagaagagagctgca
gttgtttcagagccggatcatgcagaggagaaaaccacagaaagtgaggatgagtcgtat
gaagttacacttgatgatgactttctaacggctttggaatacggaatgcctccagcttca
ggaatgggtctcggagttgataggctagtgatgcttctgacaaactccgccagcattcga
gatgttattgctttccccgtcctcaaagttcagcagtag
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