KEGG   Vitis riparia (riverbank grape): 117916737
Entry
117916737         CDS       T07274                                 
Name
(RefSeq) UBP1-associated protein 2A-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117916737
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vri03019]
    117916737
   03041 Spliceosome [BR:vri03041]
    117916737
Messenger RNA biogenesis [BR:vri03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     117916737
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117916737
Spliceosome [BR:vri03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    117916737
SSDB
Motif
Pfam: RRM_1 RRM_7 CDC45 Nop14
Other DBs
NCBI-GeneID: 117916737
NCBI-ProteinID: XP_034688787
LinkDB
Position
6:complement(8732893..8734636)
AA seq 461 aa
MAKKRKSQEQLQPKQEEEEESEEEDSSEEEEEEEEEEEEEEEDDDDDDDGEEEDSSEEEK
SSEEEEDSSEDADEADNEDDSEASKRETIRKLLQPFGKDQIIALLKEAADSNPATLSKIL
HAVESDPVHRKIFVHGLGWDATNETLTSAFKQYGQFEECNVVTDKITGRSKGYGFVLFKT
RSGARKALKQPQKKIGNRMAACHLAAAGPSGSNPVAGGDVNERRLYVGNVGPQISAEKLR
AFFAKFGEIEDGPLGFDKATGKFRGFAIIVFKTAEGMKKALEEPVKTFESCKLQCSRKVA
KTTPVQQQAVAGSTGATLPPSNYQLQAYQMGLNQGLIGQNVNPQGVLVGQNQAVGILNPV
FGAAAALNQPGLSQGFAGGLSQPVNRAPPVGLSAGYGPQLGMNSINPGVLGAYGSPAAFQ
GLGAYQSSQLGQSPASAAAAGAGRPHPGVGSVGTLPSYFGR
NT seq 1386 nt   +upstreamnt  +downstreamnt
atggcgaagaagagaaagtcccaagaacagctgcaaccaaaacaagaggaggaagaagaa
tctgaagaggaagattcttccgaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagatgatgatgatgatgatgatggtgaagaagaagattcatctgaagaagagaaa
tcttccgaagaagaagaggactcgtcagaagatgctgacgaagctgacaatgaagacgat
tcggaggcctctaagcgcgaaacgatccgcaaactcctccaacccttcggaaaagaccag
atcatcgccttactcaaagaggctgcggattccaaccctgccaccttgtccaagatcctc
cacgcggtggaatccgatcccgtccaccgcaaaattttcgtccacggccttggctgggac
gccaccaacgaaaccctaacctccgcctttaaacagtatggccagtttgaagaatgcaat
gtggttacagataagatcaccggccggtccaagggttatggatttgtgctattcaagact
cgttccggcgccaggaaggcgctgaagcagccgcagaagaagattgggaaccgaatggcc
gcctgccacctggctgcggctggcccgagcgggagcaaccccgttgcagggggggatgtg
aatgagcggagactgtatgtgggcaatgtggggccgcagatcagtgcggagaagctcagg
gcgttttttgccaaatttggggagattgaggatgggcctttggggtttgataaggccact
gggaagtttcgaggatttgccataattgtgtttaagactgcagaggggatgaagaaggca
ttggaggaaccagttaagacgtttgagagttgtaaattgcagtgttccaggaaagttgct
aaaacgacccccgtccaacaacaggcggttgcaggttccactggggccacattgcctcct
agtaattatcaactgcaggcataccaaatgggattgaatcaggggttgattgggcaaaat
gtgaaccctcaaggggttctggtgggtcagaatcaggctgttggcattctgaacccagtg
tttggtgcagctgcggcacttaatcaaccgggtttgtcccagggatttgcaggtgggttg
tcgcagcctgtgaacagggctcctcctgtggggttgagcgcagggtatggtccacagctt
ggtatgaatagtataaatccgggtgtgcttggtgcttatggttctccggctgctttccaa
gggttgggtgcgtaccagagctcccaattgggtcagtctcctgcatcagctgctgctgca
ggagctgggaggcctcaccctggtgttggatcagtagggaccttgccgtcatactttggg
cgctag

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