Vitis riparia (riverbank grape): 117916817
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Entry
117916817 CDS
T07274
Name
(RefSeq) transcription initiation factor IIB-like
KO
K03124
transcription initiation factor TFIIB
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117916817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vri03021
]
117916817
Transcription machinery [BR:
vri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
117916817
Prokaryotic type
Archaeal type
TFB
117916817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
RB_B
Ribosomal_S27e
Zn_ribbon_LysW
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
117916817
NCBI-ProteinID:
XP_034688889
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All DBs
Position
6:4303947..4314929
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AA seq
314 aa
AA seq
DB search
MTDTYCPECKRYTEVVLDHSAGDTVCSECGLVLEAHSIDEASEWRTFANESADNDPVRVG
GPSNPLLADGGLSTLISKPSNGGPSNDFLSSSLGRWQNRGSNPDRSLIQAFKTIATMCDR
LGLVATIKDLANEIYKKVEDQKPLRGRNQDAILAACIYIACRQEDKPRTVKEICSVANGA
TKKEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNQAVKAAQEAVQKSE
ELDIRRSPISVAAAVIYMITQLSDDKKLLKDISLATGVAEGTIRNSYKDLYPYASRIIPS
SYAKEEDLRNLCSP
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgacagacacgtattgcccagagtgcaagaggtacacggaggtggtgttggaccattcc
gccggcgacactgtctgctccgagtgcggtcttgttctcgaagcccactccatcgacgag
gcctccgagtggcgcaccttcgccaacgagtccgccgacaacgaccctgtccgagtcggg
gggccctccaaccctctcctcgccgacggcggcctttccacccttatctccaagccctcc
aatggcggaccctccaatgacttcctctcttcctcactgggtcggtggcagaaccgcggc
tccaaccctgaccgctccttgattcaggccttcaagaccatcgccaccatgtgtgatagg
ttgggcctggttgcaaccataaaggacctggccaatgagatttataagaaagtagaagat
caaaagcccctcagaggaagaaatcaggatgcaattttggcagcatgcatatacattgct
tgtcgacaagaagataaaccccgcactgtaaaagaaatttgttcggttgccaatggagcc
acaaaaaaggaaattggccgagccaaagagtacattgtaaaacaactagaggtagagatg
ggtcaatccatggaaatgggaaccattcatgctggggactttctgcggcgcttttgctcc
catcttggcatgaccaatcaggcagtcaaggccgcccaagaggctgttcagaaatctgaa
gagcttgatataaggagaagcccaatttcagtggcagcagctgttatttacatgataact
caattatcggatgacaagaagcttctcaaagatatttctcttgctactggagttgctgaa
gggaccatccggaactcctataaggacctttatccttacgcttccaggataatacccagt
tcatatgccaaggaggaagacctcaggaatctctgcagcccttag
DBGET
integrated database retrieval system
