Vitis riparia (riverbank grape): 117916923
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Entry
117916923 CDS
T07274
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vri03021
]
117916923
Transcription machinery [BR:
vri03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
117916923
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_N
Med13_C
CBM9_2
Motif
Other DBs
NCBI-GeneID:
117916923
NCBI-ProteinID:
XP_034689050
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Position
6:22402604..22433453
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AA seq
1988 aa
AA seq
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MWTNVFKIGGLHHISWFQFLPHESDLNPPNDKSVKVEQKDAATLVVLSTHLQLQREGFLS
TWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHSSVAEAAQVAVSRLRVVASGFWLAPGD
SEEVAAALSQALRNCIERALIGLNYMRFGDVFSKYHPFSQSEELFRRGQPTIEFIFAATE
EAIFVHVIISAKHVRALASGDMEMVLKHSSNKYSESLPVIVSPHGMLGRFTGCCPSDLVK
QVYFSKFKTSNGFIGLPYHLSQGSGCQLRGQNCYVEVTLGCPSAGTDKMLQSNSNSIRNF
PKYHVADPHAMGKGAHKGLPDHVSERTFIYPAEAVLVPVLQTSFSRSSLKRFWLQNWIGP
SLSGSSFFTHWAGKTDSLDESWIDSNGTRTQHSYNSSSNSNDSSISSITSSSSDSDVKMT
TGAGDPEADADSLTCRQSGLSSNDQLENDCHKLGSKRPRTGISESFGQVGTVKNAPMQDA
YRSGYGSVEVNNSAITGVANEQISHWDWDDDDRGAVMDIQALLSEFGDFGDFFENDALPF
GEPPGTAESHALIFPAPDCEGSSPCTGMMDVSDQMLLSVGFQSFDNFNPSPPVAMEECLT
KNQEVTNNTLSSGPLNYTPASSIGEFDHLIKAEALLTFAPEYGAVETPTSESSSSIFRSP
YLPKSRKVESSNSSAKDYVYGATPPSSPCFDGSDEKPGMPVNSKTCPVRHEASSILHSKK
YYTHVEGGKEQHEKRSFTCDNSIASGEGLTPSSFSGFNSTNATKPVQRKTTEGTIGMEHL
VLPMKTVLATEVECIMFQASMCKIRHTLLSSSSPPSIGLSRLTGSTVLNSLPGEPSTMTE
NISSKYEVKKKESIPVRIAGDFDGGMLDGPLNATVGVWRTVGVAKGAKPTNSPGVEVSSS
LPHNSFNEEGMLSYGQRQPLQELLDGMAIIVQQATSFVDVALDADCGDGPYGWLALQEQW
RRGFSCGPSMVHAGCGGILASCHSLDIAGMELVDPLSADVNASSVFTLIQSDIKNALKSA
FGILDGPLSATDWCKGRSQSGDVGTTGDGFSAEHGVNEGRDSSSTVTIGEPISPPSQSSA
GGSSCIKVSSVTDGARVDDTCRRRPNQEFSSSESEQQLGSRLRPTLFVLPLPAILVGYQD
DWLKTSANSLQLWEKAPLEPYALQKPMAYYVICPDIDPLTSAAADFFQQLGTVYETCKLG
THTPQSLGNQMEVDSGKLSSSGFVLLDCPQSMKIESSNSSLLGSISDFFLSLSNGWDLTG
FLKSLSKVLKTLKLGSCLATNPKEGISGPCTVIYVVCPFPEPIALLRTVIETSVAVGSVI
LSSDKERRSILQSQVGKALSCPAAVDEASMSNILTLSGFSIPKLVIQIVTVDAIFRVTSP
ALNELAILKETAFTVYNKARRISRGSSSDIQSSSLSGRSHSAMMQMASPTSGMWKDCVGP
RITGPSLSREGELDAGLRSGTWDNSWQTARTGGLSCDPNRNGDFLFQDEVRYMFEPLFIL
AEPGSLEHGVSATAFGNLGSESLKTLSDDGSGGFMQSASSAGSIDTGPGSQLDGSESDGF
GSGHQKNLPSLHCCYGWTEDWRWLVCIWTDSRGELLDSHIFPFGGISSRQDTKGLQCLFV
QILQQGSQILQACSSPDTGIVKPRDLVITRIGSFYELECQEWQKAIYSVGGSEVRKWPLQ
LRQAAPDGMSGSSNGSSLQQQEMSMIQERNLPSSPSPLYSPHSKASGYMKGGLGQPAARK
QLMGGGHSLVDSSRGLLQWVQSITFVAVSIDHSLSLVFQADSSTPGATQGGGTMGPSGYL
EGFTPIKSLGSTTASYILIPSPSLRFLPPTPLQLPTCLTAESPPLAHLLHSKGSAIPLST
GFVISKAVPAMRKEFRSNAKEEWPSVISVSLIDYYGGNNITQDKVVRGLTKQGGRSISSE
ARDFEIETHLILETVAAELHALSWMTVSPAYLERRTALPFHCDMVLRLRRLLHFADKELS
RTPEKSQV
NT seq
5967 nt
NT seq
+upstream
nt +downstream
nt
atgtggaccaatgttttcaaaattggaggtcttcatcacatatcatggtttcaatttctc
cctcatgaatctgatctaaatcctccaaatgataaaagtgtgaaagtagagcagaaagat
gctgcgacactagtggtgctttctacacatttgcagttacaaagggaaggatttctcagc
acatggaccaattcctttgttggaccctgggatccatctcaaggtctgcataaccctgat
gagaaaattaagctctggctttttcttcctgggcgtcattcatctgttgctgaggctgca
caagttgcagtatctagattaagagttgttgcatctggattctggttggctcctggggac
tcagaagaggttgcagctgcattatctcaggctttaagaaattgtatagagagagcactc
ataggacttaactacatgagatttggagatgtattttcaaaataccatccattttcacaa
agtgaagaacttttcaggagagggcagcctacgattgagttcatctttgcagctacagaa
gaggcaatttttgtacatgttataatatctgcaaagcatgttcgagcacttgcaagtggt
gatatggaaatggtattaaagcattcttccaacaagtacagcgagagtcttccagttatt
gtttctcctcatggaatgcttggtaggtttactggatgttgtccgagtgatcttgtgaaa
caagtgtatttcagcaagtttaagacatcaaatggattcataggtctgccttatcacctt
tctcaaggttctggctgccaactgagggggcaaaattgttatgttgaagtaacccttggt
tgccctagtgctggaactgacaagatgttgcaatcaaactcaaattccattaggaatttc
cccaaatatcatgttgctgatcctcatgcaatgggaaaaggtgctcacaagggattgcca
gatcatgtttcagaaagaacatttatttatccagctgaggcagtgcttgtcccagtcttg
caaacatcattttctagatcttctttaaaaagattctggctacaaaattggataggacca
tcattgtctggttcatctttctttactcattgggctggcaagacagattctttggatgaa
tcatggattgattcgaatgggacacgcacacagcacagctataatagtagtagcaacagt
aatgatagcagcatcagcagcataactagcagctctagtgatagtgatgtcaagatgacc
actggagctggagacccggaggcagatgctgattcgttgacatgtagacagtctggtcta
tcttctaatgatcagttggaaaatgactgccacaaattgggatctaagagacctcgaaca
gggatatcagaatcatttggccaagtgggcacagtaaaaaatgcgcctatgcaagatgca
tacaggtctggttatggatctgttgaagtcaacaattcagccattacaggagttgcaaat
gagcagatatctcattgggattgggacgatgatgatagaggtgcagttatggatatccaa
gctcttctctctgagtttggtgattttggtgacttcttcgaaaatgatgctttgcctttt
ggggagcccccaggaactgcagagtcgcatgctcttatctttcctgcaccagattgtgaa
ggtagcagtccttgtactggaatgatggatgtttcagatcagatgctgttgtctgtaggg
tttcaatcctttgacaactttaatccttctcctccagttgccatggaggagtgtcttacc
aaaaatcaagaagtcacaaacaacactctatcctctggtcccttgaactatactcctgcc
tcttctataggtgagtttgaccatttaattaaagctgaagccctattgacatttgctcca
gaatatggagcagttgaaactccaacaagcgagtcatcgtcatcaattttcagaagccca
tacttaccaaaatctagaaaagtggagagttcaaattcaagtgcaaaagattatgtatat
ggcgcaacaccaccctcttctccttgctttgatggatcagatgagaagcctggcatgcct
gtaaattcaaaaacatgtcctgtcaggcatgaggcaagttctattctccactcaaaaaag
tattatactcatgttgaaggtggaaaagagcaacatgagaaaagatcatttacatgtgac
aatagcattgcttcaggtgaggggttgacaccatcttcattctctggattcaattccaca
aatgccaccaaacctgtccagaggaaaactactgaaggcacaattggaatggagcatttg
gttttacctatgaaaactgtccttgcaactgaagttgaatgcattatgttccaagcttct
atgtgcaagatacgtcatacactgttatcttccagttctcctccatctattggccttagt
aggttaactggaagcactgttttgaattctcttcctggtgaaccaagtaccatgacggaa
aatatatctagtaagtatgaggtaaagaagaaagaatcaattccagtgaggatagctggt
gattttgatggaggaatgctagatggaccccttaatgccactgttggtgtttggcgcacg
gttggagttgctaaaggtgcaaaacctactaattcacctggtgttgaggttagctcttcc
ttgccgcataattcatttaatgaggaaggtatgctttcatatggacaaaggcaaccactt
caggagcttcttgatggcatggcaataatcgtccagcaagctacttcctttgttgatgtg
gcactagatgctgattgtggagatggtccttatggctggcttgcattacaagagcagtgg
aggcgtggattttcttgtggcccttccatggtccatgcaggatgtggggggatattagct
tcttgtcattcactggacattgctggcatggagttagtagatccactttctgctgatgta
aatgcatcatctgtgttcaccttgatacagtctgatataaaaaatgccttaaaatctgct
tttggcatcttagatggcccattgtccgctactgactggtgcaaaggtcgtagtcaatca
ggtgatgtggggaccacaggtgatggattttctgctgaacatggtgtaaatgaaggtaga
gattcttcaagcactgtaactattggagaaccaataagccccccgtcccagtcatctgct
ggtggatcatcttgcatcaaagtttctagcgtcaccgatggagctagagtggatgacaca
tgccggaggagaccaaaccaggaattctctagttctgagtcagagcagcaactgggctcc
cggctaaggccaactctttttgtacttccattgcctgctatacttgttgggtaccaggat
gattggcttaagacgtcagcaaactcactgcaactctgggaaaaggctcctcttgagcca
tatgctctacaaaaacctatggcttactatgttatatgtccagacattgatccccttacc
tctgctgctgctgattttttccaacaactaggaactgtgtatgagacatgcaagctggga
actcatacaccacaaagtttgggaaatcaaatggaggtagactctgggaaattgtcatct
tcgggttttgttctactcgattgccctcaatcaatgaagatagaaagcagcaattcctct
cttctggggtccataagtgacttttttctctctctatccaatggttgggatttgacgggc
tttcttaagtctctttcgaaggttctcaagactttgaaacttggttcatgcttggccaca
aatccaaaagagggaattagtggtccttgcactgtaatctatgtggtatgccccttccct
gaacctattgctcttctacgcactgtaattgaaacttctgttgcagttggatcggtcatt
ctctcatcagataaagagaggagatccatattgcagagtcaggttgggaaggcattaagc
tgcccagcagctgtggatgaagcatcaatgtcaaatattcttacactttcagggttcagc
attcctaaattggtaatacagattgtgacagtcgatgccatatttagggttacaagcccg
gccctcaatgagcttgccattctgaaggagactgcttttactgtttacaacaaggctcgg
cgaatttcacggggatcctctagtgatatccagtcatcatctttatctggtagatctcat
tcagcaatgatgcaaatggcttctcctacttccgggatgtggaaggattgtgttggtcct
cgaattactggaccttccctttcaagagaaggtgaacttgatgctggcttgaggtctgga
acctgggataattcttggcaaacagcaagaactggaggattaagctgcgatccaaataga
aatggagattttctttttcaggatgaagttcgttatatgtttgaaccacttttcattctt
gcagagcctggttctctggagcatggagtctcagctacagcttttggtaatttaggatca
gaatctttaaagacattgtctgatgatggtagtggaggctttatgcagagtgcaagctca
gcaggaagtatagatactggaccaggctctcagcttgatggatctgagtctgatggcttt
ggatctggccatcagaagaatcttcctagtctacattgttgctacggatggacagaggat
tggcgttggctagtttgcatctggacagattcaagaggagaattgctggacagtcatata
tttcccttcggtggaattagtagcaggcaggacacaaagggtctgcagtgcctctttgtg
caaattctacagcaaggttcccagatacttcaggcatgctcttctcctgacaccggtatt
gtgaagcccagagatcttgtgattacaagaattggatctttctatgagcttgaatgtcaa
gagtggcagaaagctatttattcagttggagggtctgaggtgagaaaatggcccctgcaa
ttacggcaagctgcacctgatggaatgtctggaagcagtaacggatcttccttgcagcaa
caggagatgagtatgattcaagagaggaacctaccatcctcgcctagtccattgtacagc
cctcactcaaaagcttctggctatatgaaaggtggtctaggacaacctgctgctcgaaaa
cagcttatgggtggaggacattcattggttgacagctccagaggtttgcttcagtgggtg
cagagcataacttttgttgcagtttcaattgaccattccttgagtttagtttttcaagcg
gattcatcaactcctggagcaactcaaggtggtggcaccatgggcccgtcaggctatcta
gaagggttcacccccataaaatctcttggatcaacaacggcgtcctacattctaatccca
tcacccagcttgcgcttccttcctccgacaccccttcagctccccacatgcctcacagct
gaatccccgccattggcccatctcctacacagcaaaggctctgcaattcccctttccaca
ggttttgtgatttcaaaagctgtgcccgccatgaggaaagagtttagaagcaatgccaag
gaagaatggccttcagttatttcagtctctctcatcgactattatggaggtaataacatc
actcaagataaagttgttcgaggcctaacgaagcaaggaggaaggagtataagctcggaa
gctagggattttgaaatagagacccatttgattcttgagacagttgcagcagagcttcat
gctctatcatggatgactgtgagccctgcatacttggagcggcgaacggcactgcctttt
cactgtgacatggttttgagactaagaaggcttcttcattttgctgataaggagctctct
cggacgcccgagaaatcacaagtgtag
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integrated database retrieval system
