Vitis riparia (riverbank grape): 117916950
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Entry
117916950 CDS
T07274
Name
(RefSeq) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117916950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117916950
03009 Ribosome biogenesis [BR:
vri03009
]
117916950
Messenger RNA biogenesis [BR:
vri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
117916950
Ribosome biogenesis [BR:
vri03009
]
Eukaryotic type
Pre-60S particles
RNases
117916950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
117916950
NCBI-ProteinID:
XP_034689084
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All DBs
Position
6:7181481..7205259
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AA seq
222 aa
AA seq
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MEKLSNIFSVLQLDADDDQLHTPDSSSTTALATGELNAFFHCTRGFVSRNDWSKYEVDRI
LEIACIITDGNLIKSVEGPDLVIHQTKECLDNMGEWCQSHHSASGLTKKVLRSTISEQEA
EKQVIEFVKRNVGTYTPLLAGNSVYVDFLFLKKYMPDLASLFPHVLVDVSSIKALCIRWY
PRDSKKAPPKENKHRAMDDIRESIRELKYYRENIFKASKSRK
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagctgtccaatatcttctcggtgctacagcttgacgctgacgatgatcagctt
catacgcccgactcctcttctactacagctttggctactggggaactgaatgcctttttc
cattgcactagaggttttgtgtcaagaaatgactggtctaaatatgaagttgatcgaata
ctggagattgcttgtataattacagatggcaatttgatcaaatcagttgagggtcctgat
ttggttatccatcaaactaaagagtgtttagacaacatgggagaatggtgtcaaagtcat
cactcagcaagtgggctgacaaaaaaagtgcttcgaagtaccatcagtgaacaagaagct
gaaaagcaggtcatagaatttgtcaagagaaatgttggtacatacacacctcttctggca
ggaaattcagtttatgtggattttctctttttaaagaaatatatgccagatttggctagt
cttttccctcatgttcttgttgatgttagcagtattaaagctttatgcatccgatggtat
cctcgagactcgaaaaaggctcctccaaaggaaaataaacacagagccatggatgatatc
agagaaagcataagggaactcaaatactaccgggagaatatattcaaagcatccaagtct
aggaagtga
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