Vitis riparia (riverbank grape): 117917129
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Entry
117917129 CDS
T07274
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1-like isoform X1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117917129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vri03009
]
117917129
Ribosome biogenesis [BR:
vri03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
117917129
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
CDC48_2
Motif
Other DBs
NCBI-GeneID:
117917129
NCBI-ProteinID:
XP_034689248
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Position
6:complement(16963430..16966118)
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AA seq
319 aa
AA seq
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MSYGYFYDDDLPIFKQIYHCLPASSLNKPQLEMGDKIIMPASALVLLTNLEISFPMLFKL
KNPASGRVTHCGVLEFTAKEGTMHLPSWMMENLLLEEGDIVKVKNVSLPAGTYMQLQPHT
KNFLDITNPRAMLETKLRSFSCLTTGDTIVIDYSNKKFYIDIVDTKPSAAVCIIDTDCEV
DFAPPLDYEEAEEPKPSNLSSKTESRESSETQSEVDTELATKLIKFKPFTGSARRLDGKP
ITESVAVVSSSPMPQQPEDTDGTNGPASSSPTTFQQSRKVVFGSKETPEAAPMASQKHPQ
EVEKPKFQAFTGKKYTLQD
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacggatacttctatgatgatgatcttccaatcttcaagcagatatatcattgc
ttacctgcctcctctttgaataagccacagctcgaaatgggtgataaaattataatgcct
gcctcggcgcttgtcctcctcacaaatttagaaattagtttcccaatgttattcaaactc
aaaaatcctgcctctggacgagttactcattgtggggtgctagaattcactgcaaaggag
ggcacaatgcacttaccatcctggatgatggaaaacttgctcttagaagagggagacatt
gtgaaagtaaagaatgtgagcctaccggctggaacatatatgcagctgcagccccatact
aagaacttcttagacatcaccaatccgagagccatgttggagactaaattgaggagcttc
tcttgtttaactactggtgacaccatagtgattgattatagcaataagaagttttacatt
gatatagtagacaccaaaccctctgctgcggtatgtattattgacacagactgtgaggtg
gactttgctcctcctcttgattatgaagaagccgaagaaccaaaaccatctaacctctct
agcaagacagaatctagagagtctagtgagacacagtcagaagttgatacagagcttgcc
acaaaactaattaaattcaagccattcactggttcagcaagacggttggatgggaagcct
ataacagaatcagtggcagtagtttcttcctctcccatgccccagcaaccagaagacact
gatggaaccaatggtcccgcgtcatccagccctactacatttcagcagtctagaaaggtt
gtgtttggctcaaaagaaacaccagaagctgccccaatggccagtcaaaagcaccctcag
gaagtggaaaaaccaaagttccaagcattcactgggaagaagtatacactgcaagactga
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