Vitis riparia (riverbank grape): 117917206
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Entry
117917206 CDS
T07274
Name
(RefSeq) two-component response regulator ORR26-like isoform X1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
117917206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vri03000
]
117917206
Transcription factors [BR:
vri03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
117917206
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
SCHIP-1_C
Motif
Other DBs
NCBI-GeneID:
117917206
NCBI-ProteinID:
XP_034689310
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Position
1:21083704..21092026
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AA seq
594 aa
AA seq
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MDSAFCPPRTDAFPAGLRVLVVDDDPTWLKILEKMLKKCLYEVTICGLARDALNLLRERK
DGYDIVISDVNMPDMDGFKLLELVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPI
RMKELRNIWQHVFRKKINEVRDIESHESMDDFQIMRNGPEQSDDGYLVSGDPTSVKKRKD
TENKHDDRDHCDPSSVKKARVVWSVDLHQKFVRAVNQIGFDKVGPKKILDLMNVPWLTRE
NVASHLQKYRLYLSRLQKEDDLKTSCGGIKHSDLSPKDSSGSFGLSNLTNMHQNDAANSG
YGFSGNKKLVQSIDIDPKVQEGDLKGIISLPRTEQKKMLTGEASDPQKARSSQMGFNHSF
GSIEQDVNYAAFDSSISAQYSWSGEKVPEAQFQEEHRPSVQLETSFNQLPVPGPQHHIQV
DCLQPTLPPISPGSSRKERDKASPAKIKPLYASYDSHHVSNVSPAGSEIDLFSVQSKCQM
VNPQAFEPISNITLNMRNQGHNQSGVNDLESFQRNLISGSGSALESLEDLQVHWLQGDCN
PMNLGLRNMEFSDYHDQKLITEVPFHLYDPLKLDYEYLSDLTEYPIMDQGLFIA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgccttttgcccgcctcggaccgacgcctttccggctggtcttcgagttctc
gtggtcgatgacgaccccacttggttgaaaatccttgaaaagatgctcaagaagtgcttg
tatgaagtgaccatttgtggtttggcaagggatgctttgaacttgcttcgggaaagaaaa
gatggatatgacattgtaatcagtgatgttaacatgcctgacatggatggttttaaactt
cttgagcttgttgggcttgagatggatcttccagtaattatgatgtctgttgacggcgaa
acaagcagggtcatgaaaggtgttcagcatggtgcatgtgattatcttcttaagcctata
agaatgaaggaactccgaaacatatggcaacatgttttcagaaagaagatcaatgaagtg
agagacattgaaagtcatgaaagcatggatgatttccaaattatgagaaatggaccagaa
cagtctgatgatgggtacttggtaagtggtgatcccacttcagtgaagaaaagaaaagat
actgagaacaagcatgacgacagagaccattgtgaccctagttctgtgaagaaagctaga
gttgtttggtcagttgatcttcatcaaaagtttgtcagagcggtgaatcagattgggttt
gataaggttggtccaaagaaaatattggacttgatgaatgtgccatggctgactcgagaa
aacgtggctagtcacttgcagaaataccgcctctacttgagcagacttcaaaaggaagat
gatctaaaaacatcttgtggtggaataaagcattctgatctatcaccaaaagattcttct
ggaagctttggcctttcgaacttgaccaacatgcaccaaaatgatgctgctaatagcggt
tatggattttctggaaataagaaacttgtgcagagtattgatattgatccaaaagtacag
gaaggtgacctgaaggggataatctcattgccaaggacagagcagaaaaaaatgttgact
ggtgaagcttctgatcctcagaaggccagaagttcacagatgggtttcaatcattctttc
gggtcaatagagcaagatgtaaactatgcagcatttgattcaagtatctcagcacaatac
tcttggagtggagaaaaagttcctgaagctcagtttcaggaagaacatagaccgagtgtt
cagttggagactagctttaaccagttgcctgtgcctggtccgcagcatcatattcaagtt
gattgcctgcagcctactttgccacccatcagtcctggatcttccagaaaagaaagagat
aaagcaagtcctgccaaaatcaagcccttgtatgccagttacgatagccatcatgtaagc
aatgtaagtccagcaggaagtgaaattgacctgttttctgttcaatcgaagtgccaaatg
gtaaaccctcaagcttttgagcctatttcaaacattacactgaatatgagaaaccagggc
cacaaccagagtggtgtgaatgatttggaatcctttcaaaggaacctgatttcagggagt
gggtcagctcttgaatcattagaggacttgcaagttcattggctccaaggtgactgtaat
ccaatgaatcttggactccgaaacatggaattttcagattaccatgaccagaagcttatt
actgaagttcccttccacttgtatgatccacttaagttagactatgagtatctctctgac
ttgacagaatatcctataatggatcaaggtctattcatagcatga
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