Vitis riparia (riverbank grape): 117917233
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Entry
117917233 CDS
T07274
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vri01002
]
117917233
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117917233
04121 Ubiquitin system [BR:
vri04121
]
117917233
Enzymes [BR:
vri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117917233
Peptidases and inhibitors [BR:
vri01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117917233
Membrane trafficking [BR:
vri04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
117917233
Ubiquitin system [BR:
vri04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117917233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Motif
Other DBs
NCBI-GeneID:
117917233
NCBI-ProteinID:
XP_034689326
LinkDB
All DBs
Position
7:complement(2900560..2906041)
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AA seq
587 aa
AA seq
DB search
MKIEGNVSVSFSIRKFKHGFWILSRIKWFSISGLHISVAGLLSIAGFVVAIKDNKMGNFG
SLPWSSERGDFSSELCLVPGLQNLGNNCFLNVILQALASCFCFRQFLHGIMEESKSSSDE
EGVESLPLTTALTTLLEELCATHGGRKVLSPRKVMLAMALYIPNFNLTRQQDAAEAFLHL
LSCLREEFSECYVPNYSSLAGISAFPNCRILTPTKREQPSEQERWQRHFLGPFNGILGSF
LTCQSCSFQITLDFEFFHSLSLSPVLNNGGAIMAGCTVEDCLRQFIVAEQVENYHCHSCW
HIAATKYLSLQPGNEAVIQKLRCCREQGSCDCRNLLNLEALPWSNSFSRTLKQLSIVRCP
KILCIHLQRASMTIFGELTKVQGHISFPLILNLSPFMKSEVGIKNWEDNFLRKRAKQQNQ
QPVPDLKHFNSQFDTRMLNCIYGLEGENMNSEARYADELGSTTLKLMGSMNFPTLGESSL
AETGGFSDTKLEHRRDKVSMARDCDSLDTHSYHLVSVVEHFGRDGSGHYTVYRRVRTEQE
REFHNGQFAPSLGHWFCISDSQVYSVSEKDVLAAEASLLFYERIADE
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgaaggaaatgtgagtgtatctttttcaatacgcaaattcaagcatgggttt
tggattttatctcggataaagtggttttcaatttctgggctgcatatatcagttgctggc
ttgttgagtattgctgggtttgtcgtggctataaaagataataaaatgggaaattttggt
agcttaccatggtcttcagaacgaggggatttttcgtcggagttgtgcttagttcctggg
ctgcagaatcttggaaataactgttttttgaatgtaattttacaggccctggctagctgc
ttttgtttccggcaatttcttcacggaattatggaggaatctaaatcttcctcggatgag
gaaggggttgaaagcttgcccctcacaactgctttgaccactttgttggaagaattatgt
gccactcatggtggaagaaaggtcttgagcccccggaaagtgatgcttgccatggctctt
tatattcccaatttcaatctcacgaggcagcaggatgcagcagaagcattccttcatctt
ttgtcttgtttaagagaagaattttcagaatgttatgttccaaattacagttctctagca
ggcatttctgcttttcctaattgtaggattcttactccaaccaagagggaacaaccgagt
gaacaggaaagatggcagcgacacttccttgggccattcaatgggattcttggcagcttt
ttaacttgtcaaagctgttcatttcagatcacattggattttgaatttttccatagcttg
tctctttcaccagtgctcaataatggtggtgccattatggctggatgcactgtggaggat
tgcctgaggcaattcattgttgcagaacaagttgagaattatcactgccacagctgttgg
catattgctgcaacaaagtacttatctttacagcctggaaatgaggcagtaattcaaaag
ctcaggtgctgtagagagcaaggctcctgtgactgcagaaatctccttaatcttgaagca
ctgccatggtcaaatagtttttcacgtactttaaagcaactaagcatagttcgttgtcca
aagattctatgcattcatctacaacgagcttcaatgaccatatttggagaactaaccaaa
gttcagggtcatatttcttttccattgatattgaacctatcgccattcatgaagagtgaa
gtgggaataaagaactgggaagataattttctaagaaagcgagcaaagcagcaaaatcaa
caacctgttcctgatctgaaacattttaattcgcaatttgatacaagaatgctaaattgc
atttatgggcttgagggagaaaacatgaactcagaggcaaggtatgctgatgaattggga
agcactacacttaaacttatgggtagtatgaattttccaactcttggggaatccagtttg
gctgaaactggaggcttctcagatacaaaacttgaacacaggcgtgataaggtgagcatg
gctcgtgattgtgattctttagatacacatagttaccatcttgtttctgttgtggaacac
tttggaagagatgggagtgggcattacactgtctacagaagagtgagaactgagcaggag
agagaatttcataatggacaatttgcgccttcccttgggcactggttttgcatttcggat
tctcaagtatacagtgtttcagaaaaagatgttcttgcagcagaggctagcttgctcttt
tatgaaagaattgcagatgagtga
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