Vitis riparia (riverbank grape): 117917320
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Entry
117917320 CDS
T07274
Name
(RefSeq) E3 ubiquitin-protein ligase ATL31-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117917320
Enzymes [BR:
vri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117917320
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
117917320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_16
Prok-RING_1
zf-RING_6
zf-Nse
zinc_ribbon_16
PHD
Prok-RING_4
PHD_NSD
RINGv
Motif
Other DBs
NCBI-GeneID:
117917320
NCBI-ProteinID:
XP_034689446
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Position
7:complement(7151199..7153074)
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AA seq
400 aa
AA seq
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MRKKLNWSRLIVRQLYDFFHAVPYGIPYFKLMPLLPLVLPSATAQTGTMSSNNPYGIDAN
FNPSMTIIIVVLVLAFFFMGLLSVYIRQCTESRITGSARPAAAINSGNTTQGLDAALIQA
FPVFVYSSVKDLKIGKGTLECAVCLSEFEDEETLRLLPKCDHVFHPNCIDAWLAFHTTCP
VCRANLTLDSGELSGSMAVTPNSSDSSDEPTSTSELTELTQVPIDVDEEQTRDSRVLLMV
NTRESPQAKFPRSHSTGHLPVQAGESSERHTLRLPEEVRKQILSAKLRRTSSSVEALQRQ
WSSRRGYRSGGEGSSRGRSNVDRQVGRSERTARSDRWVFSKAPPFFSRTVSGKSIKSAAD
GDVTSMVAPSKSFFTSVVGPLDCLAVKMEGGEQQLSRPAV
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagaagcttaattggagccgtttgatcgtccgccaactgtacgacttctttcat
gcagtgccttatggaatcccttactttaagctgatgccactcctgcctttggtgctgccg
tcggccactgcacaaactggtacgatgtcgtcaaacaatccgtatggcatcgacgctaat
tttaatccttcaatgaccatcataatagtggtcctagtcttggccttcttcttcatgggc
ttgctttctgtgtacatccgccagtgcacggagagccgtatcaccggcagcgcgcgtccg
gccgccgccataaacagcggaaacaccacccagggactggatgctgccttgattcaagca
tttccagtttttgtgtactcttcagtgaaagatctcaagatcggcaagggaacgctggag
tgcgcagtgtgcttaagcgagttcgaagatgaggagacgcttcgcttgttgcccaagtgc
gatcacgtctttcatcctaattgtatcgatgcttggttagctttccacacaacatgtcct
gtttgccgagctaatctcacgctggattctggggaactctccgggagtatggcagtcaca
cctaactcaagcgactcgtccgacgagccaacttctacatcagaactcactgagttaact
caagttccgatcgacgttgacgaagagcaaaccagagattcccgagtgcttctgatggta
aacactagagagagtccgcaagcgaagtttccgagatcgcattccaccggtcacttaccg
gttcaagcgggagagagcagcgagaggcatacgctgaggttgccggaggaggtgaggaaa
cagatcttgagcgctaagcttagacgaacgtcgagctctgtcgaggctttgcagaggcag
tggagctcgaggagaggttaccggagtggtggagagggcagtagcaggggaaggagcaac
gtggaccgccaagtcggccggtccgaacgaaccgcacggtcggaccggtgggtattttct
aaggcaccgccattcttctccaggaccgtttccggcaagtcgataaagagtgcagctgac
ggcgacgtaacgtcaatggtggcgccttccaagtcgtttttcacgtccgtcgtaggaccg
ttagattgtctggccgtgaaaatggagggaggggaacagcaactgagtagacctgccgtt
tga
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