Vitis riparia (riverbank grape): 117917337
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Entry
117917337 CDS
T07274
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vri03016
]
117917337
Enzymes [BR:
vri01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
117917337
Transfer RNA biogenesis [BR:
vri03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
117917337
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Methyltransf_25
Methyltransf_11
Methyltransf_12
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
117917337
NCBI-ProteinID:
XP_034689472
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Position
7:25875138..25879311
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AA seq
462 aa
AA seq
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MENRCSFWLPKKKRFCANFRINDSVFCGNHNTRSDAEWVPCPIDPSHSVLSENLEGHMKR
CPLLKQAQSLSSQPFYQKGINGGKDDENEGDEKGAAAPTLASLENATSLMKRNAVYSMTV
PEFSILISKIQSIHSSIRNDIRDSYRVPEACDIWIKREVDRKLPFQEKHVVQQASILGNL
EEFGVLEKSSGDDQMEQCDSDRSSGDDNGVPAVVEFGAGRGYLTQMLADCYGIKRVFLVE
RKSYKLKADRSLRQKESLILERLRIDIEDLNLKAVESLQGVPYLAIGKHLCGPATDLSLR
CCLAEESNQDDAVQCCSGHYLRGLAIATCCHHLCQWKHYINKKYLMNLGITKDDFHAITW
FTSWAVDADHGSDLSDVAGCRLHLQSIEKKECVEDVGGVAEIVQNMKAMERAVVGFMCKE
IIDMGRLMWVKEHGLETQLVKYVPPTISPENHLLIAKHVNHL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccgctgcagcttctggcttcccaagaagaaacgtttctgtgcaaactttcgt
atcaacgattccgtgttttgcgggaaccacaacactaggtctgatgcagagtgggtgcca
tgcccaatcgacccttctcactctgtactgagtgaaaatcttgaaggacatatgaaaaga
tgcccattactcaagcaagctcagtccttgagtagtcaacctttctaccaaaagggcatc
aatggtgggaaagatgatgaaaatgaaggagatgagaagggagcagcggcacccacatta
gcttctttggagaacgctacctcattgatgaagaggaacgctgtatatagcatgactgta
cctgaattctccatattaattagtaaaattcagtctattcatagttcaatacgtaatgat
attcgagactcttatagggtgcctgaagcttgcgatatatggatcaagagagaagtagac
cggaaattaccatttcaagagaaacatgttgtgcaacaggcgtcaattcttgggaatttg
gaagaatttggggtattggagaaatctagtggtgatgaccaaatggagcaatgtgactct
gatagatcatcaggggatgataatggagttcctgcagtagtcgagtttggagccggaaga
gggtacttgactcaaatgcttgcagattgttatgggatcaagagagtttttttggttgag
cgaaagtcatacaagctgaaggctgatcgatcactgcgacagaaagagagcttgatatta
gagcgtttgagaattgacattgaggatttaaacttgaaggcagttgagtctttacaggga
gttccttaccttgcaattggtaaacatctatgtgggcctgcaacagatttgagcctgaga
tgttgccttgctgaggaatccaatcaagatgatgctgttcagtgctgtagtggtcattac
ctcagaggcctagctatagctacttgttgccatcatctttgccagtggaaacactatata
aataaaaaatatttaatgaatctggggatcactaaagacgattttcatgctattacttgg
tttactagctgggcagtggatgcagatcatggctcggatctttcagacgttgctggttgc
agactgcatctacaatcaattgagaagaaagaatgtgttgaagatgttggtggagttgct
gaaattgtgcagaatatgaaagccatggaaagggcagtagtagggttcatgtgcaaggag
atcatagacatggggaggttgatgtgggtcaaagaacatgggttagaaacacagcttgtg
aagtacgtcccaccgaccatctctccagaaaaccatttactgattgccaaacatgtcaat
cacctgtaa
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