Vitis riparia (riverbank grape): 117917356
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Entry
117917356 CDS
T07274
Name
(RefSeq) uncharacterized protein LOC117917356 isoform X1
Organism
vri
Vitis riparia (riverbank grape)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6469
AAA_12
AAA_11
UvrD-helicase
AAA_19
AAA_30
AAA_22
Viral_helicase1
UvrD_C
AAA_16
UvrD_C_2
nSTAND3
DEAD
AAA
ResIII
SNAP
Flavi_DEAD
ABC_tran
Motif
Other DBs
NCBI-GeneID:
117917356
NCBI-ProteinID:
XP_034689494
LinkDB
All DBs
Position
1:complement(20238193..20258156)
Genome browser
AA seq
2812 aa
AA seq
DB search
MEKEGSNKKRAFANDSRLIELLFSWSLEDIFNNDLYRNQVERIPETFGTAGHYFGSYIFP
LLEEIRAEMCSSMEDIHSAPFAEVTSFDESKPYGSLLYDVKVDNWRNRFSDHGREPYKTL
PGDILILTDAKPETVSDLQRVGRTWTFASVTRIPDDENEDNSSSTYFKVKISNEYEVNDE
KQRSMFVIFLINIVTNKRIWNALHMSGNMSIISEVLSSDSQVKENCCQCPVWSDGVYAEN
FPMSSSSNLNESQTKAVVTCLRKIQCNHKPSVELIWGPPGTGKTKTVSVLLFKLLRTNIR
TLACAPTNVAVTEVASRVLKLTKESFENSLFCSLGDILIFGNKDRLKVGADIVEVYLDYR
VDRLIECFGPLTGWRYCFTSMIDFLEDCVSHYHIFLENELRKEKSCSDEGGSTKEEVFMK
NELSSNECGSSKKVDKSFIEFARDRFKATAGPLRRCVQIFCTHLSKDFILEQNFQNMVDL
IGLLDSFESLLSKDNVVPEELEKLFSHQEAVQDSSPSFSDSSNLLYMSRGECLSVLKTLR
GSLNELSLPSVMNEGLIKEFCFKMASLIFCTASSSYKLHSANMKPLDLLVIDEAAQLKEC
ESTIPLQLPGIRHAILIGDECQLPAMVSSKVSEEAGFGRSLFERLSSLGHFKHLLDVQYR
MHPSISFFPNSKFYLNQILDAPNVKSENYNKHFLSGPMFGSYSFINIRGKEEHDDVGKSR
KNMIEVAIVIKIVRNLYKEWSGSNQKLSIGVISPYSAQVVAIHDKLGQKYEKLGNFSVKV
KTVDGFQGGEEDIIIICTVRSNSGGSIGFLSNPQRTNVALTRARYCLWILGNERTLANSE
SIWEDLVLDAKKRKCFFNAEEDKDIAKAILEVKTEFDQLDHLLDGSSILFKSAMWKVLFS
DNFKKSFVKLRSDHTKKSVLNLLLKLSSGWRPKRLNVDRVCESSSHILKQFKVEGLYIVC
SIDIVKNTQVLRVWDILPLEGVLKLAKRLDNIFQRYTDDFINCCNEKCLDGNLEVPKTWP
TSLNIIQFKNNDESQGNESAGTFDGKSYVENSKVSESLLLMKFYSLSSGMVTHLLSDHDG
RELDLPFEVTDQEQEIILYCRSTFILGRSGTGKTTVLTMKLFQKEQQHRMAMEGFQGDKG
NASTNATYRKEVGVSVGETQVAVLRQLFVTVSPKLCYAVKQHVSHLKSFAHGKNFSAEES
SNNKDYVDDAELFDDIQDSLVDIPPKSYPLVVTFHKFLMMLDETLSNSYFDRFHDVRELS
HGKSRSLSSIGMQTLIRTKEVTYDRFSSSYWPHFNSQLTKKLDSSSAFTEIISHIKGGLK
GGRVPDGKLSREDYVLLSEGRVSTLSGQKRERIYDIFQDYEKMKMERGEFDLADLVIDLH
HRLRQQRYMGDEMDFVYIDEVQDLTMRQIALFKYVCRNVNEGFVFSGDTAQTIARGIDFR
FQDIRSLFYNEFVMESSDERDGRKEKGQISEIFHLSQNFRTHAGVLKLSQSVIDLLYRFF
PQSIDVLSPETSEIYGEAPVLLEPGKDENAIITMFGNSQNIGGSMVGFGAEQVILVRDDC
SRKEISDYVGEQALVLTILECKGLEFQDVLLYNFFGSSPLKNQWRVVYEFMKEQNLLDST
APRSYPSFSQEKHNVMCSELKQLYVAITRTRQRLWICENIDELSKPMFDYWKKLCLVQVT
QLDESLANEMRVASTPEEWKATGIKLLREHHYEMATRCFERAEDTYWARLAKAHGLKAAA
EQKRHLNPEAAHVDLRKAAEIFEEIGEARPAAKCFFQLNEYERAGRIYLEKCGESELEKA
GECFSLAALYELAAEVYARGHFFSECLSACTKGKFLDMGLRYIHYWKQHATTSTFMIKRS
KEIGKIEQEFLESCAHHYHELKDNRKMMEFVKAFHSMESKRNFLTTLDCLDELLWLEEEL
GNFMEAANIAKLSGEILLEAEMLGKAGNYRDASTLFLCYVFANSLWASGSRGWPLKQFVK
KEEVLTKARLFAERESKQFYEFVCMEASILSNEQTSLFEMNQCLTTSQRHESVRGEILSA
RKIIDAHLNSNTTKYEWTDEWVSDLKQHSEVRLSQNCISVETLLYFWNVWKENVVNIFES
LGLDETTQDVKNYSSYGEFCFNYFGVRKQCKNLNLIHALLIPDANWLRAVDDRFIRRTGK
LVYVDADQFASAARSYWSSELLSVGIKVLENLEVLYNYSTWKSLSLFCQSKLLVHMFEVS
EFLLKLKFLDLRYNAARTLQKFLDISTRQFCSKIFPLDWKKSSTENMVSLRETELSRNLL
EEVISTSISIKSEFTYGQIGRVASWILGMGKLTTELYEKIAEKFAEKFAVNPPWKAFINN
LSGNIGSGFPQDSVPINESQKHVSLVLTLDGALRDTYNAYWGQSDYISPGYFLYLVDRLL
ILVTSFQGYCFTTKSSYIEWLIFQEWNSFPNPGLVANQQFPFGATLDYVAYIAQDLLYKT
QVTVEWIRKSNINFNEYYPLLVLRLVIIICLLCVNAKHEKYVEMLFQLLRRGDITSLLPR
DFCDVLRRRRKRNQFSISVNVLAEALRKVDNPLVIVKLQRNSSEVSCPDAIFIDMTVDQC
REDLLCVLFQRNINSSSIELPSSSNASSNLGSGVDQGLKSQNDEVIGGNPQNNYEHFWDF
LDAVDSSAMNFLPNAPRVKVEVENNIRLITSVLATFHKNPAEGEDVNLCQELNSMLDELK
QLSSVLNVSNNGSRIGELFVSLNSRRPRVEPLLNQLFLQKDSNSVNEASSSATTIPSGIQ
NQVDKGTGKAEESEEADEVNTKTPSNSNNREAESKKGKGKAKKGKRGKGRRK
NT seq
8439 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggagggttcaaacaagaagagagcatttgccaacgactccaggctgattgag
ctgctgttttcttggtcccttgaagacattttcaataatgatctgtacaggaaccaggta
gaaaggatcccagagacctttggaacagcaggtcattatttcgggtcttatatttttcct
ttattggaagaaattcgagcagagatgtgttcaagtatggaggacattcacagtgcaccc
tttgctgaagtgacctcttttgatgagagcaaaccatatggatcattattatatgatgtt
aaagtggataactggagaaatagatttagtgatcatggcagggagccttacaaaactttg
cctggggatattttaattttaacagatgctaaaccagaaacagtttctgatttacaacgg
gttggaaggacatggacttttgcatctgtcactagaatcccagatgatgagaatgaagac
aatagttcatcgacttattttaaagtcaagatatcaaatgaatatgaagtcaatgatgag
aagcaaagatcgatgtttgtaattttcttgattaatatagtcactaacaaaagaatatgg
aatgctttgcacatgagtgggaatatgagcattataagtgaggttttgtcttctgattct
caggtcaaggaaaattgttgtcagtgtcctgtatggagtgatggtgtatatgcagaaaat
tttcctatgagttcatcatctaatctaaatgaatcccaaaccaaggcagttgtaacttgt
cttagaaagattcagtgtaaccacaaaccttcagtggaacttatatggggaccgccaggg
acgggaaaaactaaaacagtcagtgtgctgctgtttaaacttttaaggacgaatatcaga
acacttgcttgtgccccaacaaatgttgcagtaacggaagttgcctctcgtgtactcaag
ctgacaaaagagtcgtttgaaaatagtttgttttgttcattaggagatattctcatattt
gggaataaggaccggctgaaggttggggcagacattgtggaggtatatttggattatcgt
gttgataggcttattgagtgctttgggcctcttactggttggagatattgtttcacttcc
atgatagattttcttgaagactgtgtttctcactaccatattttcctggaaaatgaatta
aggaaggagaaaagctgcagcgatgaaggtggaagtaccaaggaagaggttttcatgaaa
aatgaattaagcagcaatgaatgtggaagttccaagaaagtggataaatcatttattgag
tttgcaagagatagattcaaggctactgctggccctctcagaagatgtgtccagattttt
tgcactcatctgtctaaagatttcattctggaacagaatttccagaacatggttgacctt
attgggttacttgactcatttgaaagtttattatccaaagataatgtggttcctgaggag
ctggagaagctgttttcacatcaagaagcagttcaggattcttctccatctttctcagat
tcttcaaaccttctgtacatgagcagaggagaatgcctttctgttctaaaaacacttcgt
ggttctcttaatgaactcagccttcctagtgttatgaacgaaggtttgataaaagaattc
tgttttaaaatggcttcattaattttctgcactgcttcaagttcatataagctccattca
gcaaatatgaaaccactggacttgttggttatcgatgaagctgcacaattgaaagagtgt
gaatcaacaatacccctacaacttcctggtataaggcatgccattctcattggtgatgaa
tgccaattaccagcaatggttagtagcaaggtttctgaagaagctggttttggaagaagt
ttatttgaaaggttgagttcattaggtcattttaagcaccttctcgatgtgcagtacaga
atgcatccatcaataagtttcttcccaaattcaaaattttatctcaaccagatcttggat
gcaccaaatgttaaaagtgaaaactacaacaaacattttctttcaggacccatgtttggc
tcctattctttcataaatattcgtggaaaggaagaacatgatgatgttggtaagagccgt
aaaaatatgattgaggtggctattgtgatcaagatagtacgaaatctatataaagagtgg
agtggctcaaatcagaagcttagcattggtgtgatatctccatattctgctcaagttgtg
gcaatccacgataaacttggacagaagtatgagaagcttggtaacttttcagtgaaggtg
aagactgttgatgggttccagggcggggaggaagatataataataatatgtactgtaaga
tctaattctggtggatcaattggattcctttccaatcctcagagaactaatgttgctttg
acaagggctaggtactgtctttggattttggggaatgaaaggactctagctaatagtgaa
tccatctgggaagacttagttcttgatgccaagaaacgtaagtgtttcttcaatgctgaa
gaagataaggatattgctaaagccatattagaggtcaagacagagtttgatcagcttgat
catttgctggatgggagtagtatacttttcaaaagtgctatgtggaaggttcttttcagt
gacaactttaagaaatcatttgtaaagctgcgatcagaccacacaaaaaagtctgttttg
aacctgttactgaagctttctagtggatggagaccaaagaggttgaatgtagacagagtt
tgtgaaagctcttcccatatcttgaaacaattcaaggttgaaggattatatattgtttgc
tcaattgacatagttaaaaacacccaagttttgagggtttgggatattttgcctctggaa
ggtgttctaaaattggctaaacgtcttgataacatattccagaggtacactgatgatttt
atcaattgctgcaacgaaaaatgtcttgatgggaatttagaagttccaaagacatggcca
acctccttgaacatcatccagtttaagaacaacgatgaatctcagggcaatgaaagtgca
ggtacttttgacggtaaaagttatgttgagaattcaaaggtgagtgaaagtttattactg
atgaagttctactccttatcatcgggtatggtaacccacttgctctctgaccatgatggt
agagaattagatctcccatttgaagtaacagaccaagaacaggagataattctttactgt
agaagcacctttatacttggacgatcaggtaccggtaaaacaactgttttgaccatgaag
ctattccaaaaggagcaacaacaccgtatggcaatggaaggtttccaaggagacaagggt
aatgcatccacaaatgctacctacagaaaggaggttggggtgagtgttggagagactcag
gtggctgtcttgcgacagctttttgtgacagtcagtcctaaactgtgctatgctgtcaaa
caacatgtctctcatctgaaaagctttgcccatggaaagaatttttcagcggaagaaagt
tcaaataataaggattatgtagatgatgctgaactattcgatgatattcaagattctctt
gttgatattccacctaaatcataccctctagttgtgacattccataagttcttgatgatg
cttgatgaaacattgagcaattcatactttgacagattccatgatgtacgtgaactttct
catggaaaaagcaggagtttaagttcaattggcatgcagactttaataagaacaaaagag
gttacatatgacaggttcagttcttcttattggccccatttcaatagccagctaactaag
aagctagattcttccagtgcctttactgagataatttctcatataaaaggtggcttgaaa
ggagggagggtccctgatggtaagctttcccgggaggattatgtgctgctatctgaaggc
cgggtgtctactttaagtgggcaaaagagagagagaatttacgacatctttcaagattat
gaaaagatgaagatggagagaggtgaatttgatttggctgatttagtaattgatcttcat
caccgacttagacagcagagatatatgggcgatgaaatggattttgtatacattgatgaa
gtgcaggatcttaccatgagacagattgctctttttaagtatgtctgcagaaatgtgaat
gagggttttgttttctcaggcgatacagcacaaactattgcaagggggattgattttagg
ttccaagatatacggtcactgttctacaatgagtttgtaatggagtcaagtgatgaacgt
gatggaagaaaagagaaaggtcaaatctcagagattttccatttgagccagaattttcgt
acccatgctggtgttctcaaattatcacagagcgttatcgaccttctttatcggtttttt
cctcaatctattgatgtcttgagtccagagaccagtgaaatttatggggaagctcctgtt
ttgcttgaacctggaaaggatgaaaatgcaatcataaccatgtttggaaacagtcaaaat
attggagggagtatggtcggttttggagcagagcaggttattttagtgcgtgatgattgt
tctaggaaggaaatttcagattatgttggggagcaagctctcgttcttacgatactggag
tgcaagggcctagagttccaggacgtgttgttgtacaacttttttgggtcatcacctttg
aaaaatcaatggagagtagtatatgaatttatgaaggaacaaaatttgctagactccact
gctcctaggtcctacccaagtttcagtcaagaaaaacacaatgtcatgtgctctgaactg
aagcaattgtatgtggctataactcgtacgaggcaaaggttgtggatttgtgaaaacata
gacgagctgtccaagcctatgtttgactattggaagaaattgtgccttgtgcaagttaca
cagctggatgagtctcttgcaaatgaaatgcgagttgctagcacccctgaggagtggaag
gctacgggtatcaagctacttcgtgagcatcactatgagatggcaacaaggtgctttgaa
agggcagaagacacctattgggcaaggctggctaaggctcatggccttaaagcagcagct
gaacagaagcgtcatttaaatcctgaagctgctcatgttgatcttaggaaggccgcagaa
atatttgaagaaattggcgaggctcgacctgctgccaaatgcttttttcagttaaatgag
tatgaaagagcaggtagaatttatctggaaaaatgtggggaatccgagctggaaaaagct
ggagaatgtttttctctggcagcactttatgaacttgcagctgaagtgtatgctaggggc
cactttttctcagagtgtttgtccgcatgcacaaaaggaaaattcttggacatgggtttg
cgttacatccactactggaaacaacatgcaactacgagtacttttatgatcaagagaagt
aaagaaatagggaagattgaacaagaatttttggagagttgtgcacatcattatcatgag
cttaaagataatagaaaaatgatggaatttgttaaagcttttcactccatggagtcaaaa
cgcaacttcttaactacattagattgtcttgatgagcttctgtggttggaagaagaattg
ggtaactttatggaggctgcaaacattgcaaaactaagtggggagattctacttgaggct
gaaatgctgggtaaggctggaaactacagagatgcatcaacactttttctctgttatgtg
tttgccaactctctttgggcatctggaagcagaggttggcccttgaagcagtttgtgaaa
aaggaggaggtcttaacaaaagccaggttatttgcagagagggagtcaaagcaattctac
gagtttgtttgtatggaggctagtattttatctaatgaacagactagcttgtttgagatg
aaccaatgtttgaccacttcccagagacatgaaagtgtcagaggtgaaatattatctgct
cgaaaaattattgatgctcatcttaattcaaataccaccaagtatgagtggacagatgaa
tgggtttctgatctgaagcagcattcagaagtcagactttcccagaactgtatttcagtt
gaaactttgttatacttttggaatgtttggaaggagaacgttgttaacatatttgagtct
cttgggcttgatgaaaccacccaagatgttaagaactattcaagttatggagaattctgt
ttcaactactttggagtgaggaagcagtgtaaaaatctgaatttaatccatgctttgctt
atccctgacgccaattggttgagagcagtcgatgatagatttattcgaaggactggtaag
ttggtttatgttgatgctgaccagtttgcttctgctgctcggagttattggagttcagag
ttactctctgttggcattaaggtgttggaaaatctggaagtcctctataattactctacc
tggaagtcattgtctctgttctgccaaagcaagttgcttgttcacatgtttgaggtttca
gaatttcttttgaagcttaagtttcttgacctcagatacaatgctgccagaacactgcag
aaattccttgatatatcaactaggcaattttgttcgaaaatttttcctttggactggaaa
aagtcatcaacagagaacatggtttctctcagagaaactgagctttccagaaatttactt
gaagaagttatttctacaagcatcagcataaaaagtgagttcacttatgggcaaattgga
agagtggcctcttggattcttgggatgggtaagctgactactgaactatatgagaagatt
gcagagaagtttgcagagaagtttgccgtgaatccaccatggaaggcattcatcaataat
ctcagtgggaacataggatcaggatttccacaggattcagtgcctatcaatgaatctcaa
aagcatgtgtctttggttttgacgcttgatggagcattgagagatacctacaatgcttac
tggggacaaagtgattatatatcgcctggttacttcttgtatcttgttgatcgccttctt
attttggtgacttcttttcagggatactgtttcactaccaagtcttcctatatcgagtgg
cttattttccaggaatggaatagcttcccaaatccgggtttagtggctaatcagcaattt
ccttttggagcgactcttgattatgttgcctacatagctcaggatctcctttacaagaca
caagtcacagtggagtggattagaaaatctaatatcaattttaacgaatactacccattg
ttagtgctgagattggtaattataatttgtttgctttgtgtgaatgcgaaacatgagaaa
tatgtcgagatgctcttccaattgctcaggaggggtgacattacttcactattaccacgg
gacttttgcgatgtgctgaggagaagaaggaaacgtaatcagttcagcataagtgtaaat
gtgcttgctgaagcgttaagaaaagttgacaatcctctcgtgatagtgaagttgcagaga
aattcttcagaagtgtcatgcccagatgccatcttcatagacatgacagtcgaccaatgc
agagaggacctattatgtgtcttgtttcaaagaaacatcaattcatccagcatagaactt
ccctcaagtagtaatgcatcctcaaacttaggttctggggtggatcagggcttgaagtct
cagaatgatgaagttataggaggcaatccgcaaaataattatgagcacttttgggatttt
cttgacgctgtggacagcagtgctatgaacttcttgcccaatgcccctagggtaaaggtg
gaggtagagaataatattcgccttataacttcagtgctggccacctttcataagaaccct
gcagaaggtgaagatgtaaacctttgtcaagaattgaactccatgcttgatgaattgaag
cagctttcttctgtattgaatgtgagtaataatggttcgagaattggggagcttttcgta
agtctgaattcaagaaggccacgagtagagcctttgttgaaccagctatttttgcagaag
gattcaaattcagtaaatgaggcatcatcatcagctaccaccatcccctctggtatccaa
aaccaagtagataaaggcacaggcaaggctgaagaaagtgaagaggctgatgaggttaat
accaaaaccccaagcaactctaacaatagggaagctgaaagcaagaagggaaagggaaaa
gccaagaagggaaaaaggggaaaaggtaggagaaagtaa
DBGET
integrated database retrieval system
