Vitis riparia (riverbank grape): 117917406
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Entry
117917406 CDS
T07274
Name
(RefSeq) probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00730
Thiamine metabolism
vri00900
Terpenoid backbone biosynthesis
vri01100
Metabolic pathways
vri01110
Biosynthesis of secondary metabolites
Module
vri_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
117917406
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
117917406
Enzymes [BR:
vri01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
117917406
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Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
TPP_enzyme_C
Transketolase_N
Transketolase_C_1
Motif
Other DBs
NCBI-GeneID:
117917406
NCBI-ProteinID:
XP_034689565
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All DBs
Position
7:6637954..6643388
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AA seq
714 aa
AA seq
DB search
MAVSACVVRTNPSISPCLKAPRPSLSGRKQSCLRACAANTSDGEEGNKMTRKEKDGGWKI
EFTGEKPPTPLLDTINYPVHMKNLSTQDLEQLAAELRADIVQSVSKTGGHLSSSLGVVEL
TVALHHVFNTPEDKIIWDVGHQAYPHKILTGRRSRMHTIRKTSGLAGFPKREESVHDAFG
AGHSSTSISAGLGMAVGRDLLGKTNSVVAVIGDGAMTAGQAYEAMNNAGYLDTNMIIILN
DNKQVSLPTATLDGPAIPVGALSRTLTKLQSSTKFRKLREAAKSITKQLGGQTFEVAAKV
DEYARGLLSASGSTLFEELGLYYIGPVDGHNVDDLVGIFQKVKAMPAPGPVLIHIVTEKG
KGYPPAEAAADRMHGVVKFDPKSGQQFKSKSPTLPYTRYFAESLIEEAEVDDKIVAIHAA
MGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLASEGLKPFCAIYSSFLQRGYDQVIH
DVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELMHMVATAA
AIDDRPSCFRFPRGNGIGAVLPPDNKGTPLEIGKGRILTEGHRVALLGYGSMVQQCVEAA
SILRSRNIFVTVVDARFCKPLDGNLIRRLAKEHEILITVEEGSIGGFGSHVSHFLCLNGI
MDGPLKLRAMVLPDRYIDHGSPEDQIQEAGLSSKHISATVLSLLGRQKEALTLN
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttccgcgtgtgtggttagaacaaacccatccatctctccatgtctgaaagct
ccaaggccaagcctcagtggcagaaaacagtcctgcttgagagcttgtgccgcaaatact
tcagatggtgaggaagggaacaagatgaccagaaaagaaaaggacggagggtggaagata
gaattcaccggagaaaaacctcccacaccactactagacacaatcaattatccagtccac
atgaaaaacctctccacccaggatcttgaacaactagcagcagagcttagagcagatatc
gtacagagtgtatcaaaaacaggtgggcatctaagctcaagcttaggagtagtggaactg
acagtggctcttcatcatgtattcaacacccccgaagacaagatcatatgggatgttggc
caccaggcctacccgcacaaaattttgacaggaaggaggtctaggatgcacactatcagg
aaaacctcaggtttagcagggtttcccaaaagggaagagagcgtccatgatgctttcggt
gcgggacatagttctaccagcatctccgctggtcttggtatggcagtaggaagggatctt
ctagggaagaccaacagtgttgttgcagtgattggggatggagccatgactgcagggcaa
gcatatgaggcaatgaacaatgcagggtaccttgatactaacatgattatcatattaaat
gacaataagcaagtctctttgcccacagctactcttgacggtcctgcaattcctgttggg
gcccttagtagaactttaaccaagctccaatcaagcaccaagttccgcaaacttcgtgaa
gctgcaaaaagcatcacgaagcagcttggagggcaaacatttgaagttgcagccaaggta
gatgagtatgcgaggggtctgctcagcgctagcggatctactctgtttgaggagctaggg
ttgtattacattggtccagtggatggtcacaatgttgacgatctagtaggcatttttcag
aaagtgaaagcaatgcctgcaccaggtccagttctgatccacattgtaacagagaaaggg
aagggttatcctccagccgaagcagcagctgatagaatgcatggggttgtcaagttcgac
cccaagtcaggccagcaatttaaatccaaatccccaacacttccatatactcggtacttt
gctgaatctctgattgaagaagccgaggtagatgacaaaattgtagccatccatgctgca
atgggtggtgggactggcctcaattatttccagaaaaggtttcctgatcgttgctttgat
gtggggattgctgagcaacatgctgtcacatttgcagctggtttagcctcagagggtctc
aagccattctgtgccatctactcatccttcctgcagcgaggatatgatcaggtgatacat
gatgtagatcttcaaaagctaccagtccgatttgctatggatcgagctggtctggttggt
gcagatggccctactcattgtggagcatttgatatcacctatatggcttgcttgcccaac
atggtggtcatggctccatctgatgaagcagagcttatgcacatggttgccacagcagca
gccattgatgacaggcctagctgcttcaggttcccgaggggaaatggaattggagctgtt
cttccacctgataacaaaggaaccccacttgagattggaaagggaagaatactgacagaa
ggccatagggttgctcttctgggatatggttctatggttcagcaatgtgttgaagctgca
agcattcttaggtcccggaatatttttgtgacagtagtggatgcgaggttttgcaaacct
ttggatggaaatctcatcaggagattggccaaagagcatgaaatcctgatcactgtggag
gagggttcaattggaggttttggatcccatgtttctcacttcctgtgcttaaatggtatt
atggatggacccctaaagttgagagcaatggtacttcctgatagatacattgaccatgga
tcacctgaagatcagattcaagaagcagggctctcttccaagcatatctctgcaacagtg
ctatctctcttgggaaggcaaaaagaagctctcaccctcaactga
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