Vitis riparia (riverbank grape): 117917459
Help
Entry
117917459 CDS
T07274
Name
(RefSeq) 3-ketoacyl-CoA synthase 20-like
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00062
Fatty acid elongation
vri01100
Metabolic pathways
vri01110
Biosynthesis of secondary metabolites
vri04626
Plant-pathogen interaction
Module
vri_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
117917459
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
117917459
Enzymes [BR:
vri01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
117917459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_N
Chal_sti_synt_C
ACP_syn_III
HTH_18
Motif
Other DBs
NCBI-GeneID:
117917459
NCBI-ProteinID:
XP_034689639
LinkDB
All DBs
Position
7:complement(29775667..29778805)
Genome browser
AA seq
469 aa
AA seq
DB search
MFLLGFISNDLLGFLISQSSFILPAAAIMVGLTLIAFMLYLFAFGSSPKIFLLDFACYKP
PSSLACTKEMVIERLRLHGNFSDKSLELMKKLMKTSGLGEATYLSEGLLKEPLDMSTEAT
RKEAEMVVFGAVDELLGKTGVKGEEIGIVVVHSSIFNTVPSLASMIVNRYKLRENVLSYN
MSGMGCSAGLLSIGLAKDLLKVHCNSYALVVTTEIITQGCYMGKDPSKLIGNCIFRMGGA
AVLLSNRLSDCNDSKYQLIHTVHTNTASSDRSYNCIIQEKDHEGHVGITITKDLLVVASE
IIKSNVATLAPLILPASERLLYLINYLIRYFHVASIEPHVPNVKRAVDHFFPHVGAKPIL
DKVARNLRMSEGQMEASRMTLYRFGNTSSSSVWYELAYAEAKGRIKRGDRVWQIAYGSGF
KCSSAFWKAIRTVDREKMNPWSDVIDEFPVVDPHNTEIFPYAFELSKSK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtttctccttggattcatatcaaacgatctcttagggtttctgatcagccagtccagt
ttcatcctgccggcggcggccatcatggtgggcttaaccctaattgcttttatgttatac
cttttcgccttcgggtcttctcctaaaattttcttgctagattttgcatgctacaaaccc
cccagctctctagcatgcactaaggaaatggtgattgagaggttgaggctgcatgggaat
ttctctgacaagagtctggaattgatgaagaaactaatgaagacgtcgggactaggcgag
gctacgtacttgtctgagggactacttaaggagccgctggatatgtcgacggaggcgacg
aggaaagaggcggagatggtggtgttcggagctgtggatgagttactgggcaagaccggg
gtgaagggtgaggagatagggatagtggtggtgcatagcagtatttttaacactgttccg
tctctggcttccatgattgtgaatagatataagcttcgtgagaatgttttgagctacaat
atgagtggaatggggtgcagtgctggactcttatccatcgggcttgccaaagaccttctc
aaggtgcactgtaattcgtatgcattagtggtgactactgagattatcactcaaggttgt
tacatggggaaagatccatccaagctcatcggcaactgcatctttcgcatgggtggcgcc
gcagttctcctctccaaccgactatctgattgcaacgactccaagtaccaactcatccac
accgtccacaccaacactgcaagctctgatcgttcgtacaattgcatcatccaagaaaaa
gaccatgaaggccacgtgggtatcactatcaccaaagatctcttggtcgtggcctctgag
atcattaaatccaacgtagccacactggctcccttgatccttcccgcatcagaacgactc
ctctatcttatcaactatttaattaggtatttccatgtcgcaagcatcgagccgcatgtg
ccaaatgtcaagcgtgcagtggatcatttcttccctcatgtgggtgcaaagcccatactg
gacaaagtggcgaggaacttgagaatgagtgagggacaaatggaagcttctagaatgacc
ttgtataggtttgggaatacatcgagtagttcagtatggtatgagctagcttatgcagag
gccaagggtaggatcaagaggggtgatcgtgtgtggcagattgcatatgggtctggcttt
aaatgtagtagtgcattttggaaagccatcaggactgttgatcgtgagaaaatgaatcct
tggagcgatgtgattgatgaatttccagtggtggacccgcacaacactgaaatatttcct
tacgcttttgagctgtcaaagtcaaagtga
DBGET
integrated database retrieval system