Vitis riparia (riverbank grape): 117917468
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Entry
117917468 CDS
T07274
Name
(RefSeq) piezo-type mechanosensitive ion channel homolog isoform X1
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117917468
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vri04040
]
117917468
Membrane trafficking [BR:
vri04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
117917468
Ion channels [BR:
vri04040
]
Other channels
Mechanosensitive channel (Piezo)
117917468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_cap
Piezo_THU9_anchor
THU_Piezo1
Motif
Other DBs
NCBI-GeneID:
117917468
NCBI-ProteinID:
XP_034689647
LinkDB
All DBs
Position
7:complement(28478796..28502416)
Genome browser
AA seq
2487 aa
AA seq
DB search
MGSFLGGVVLPLLFLTAALLSWSLISLVDLIVFLLIQFTTPKTGFRFRRQHLLLWFVVIF
SILVILSQVTFLIIWAVEGGKWSMEDAWWVKVIGFMRVMSWRFPSAIYFLVIQLLVVFVA
LVEIFGNRFGPTPWRDSCWGHLFSAVEHLGSHLRVASCLLFPAVQLVVGISHPSWISLPF
FIGSCVGLVDWSLTSNFLGLFRWWRPLQLYAGFNIVLLYVYQLPIGLPKLFQRIADFIGL
YKISGKSDWPEICSALSLVVFYIVLSYIKCDLEEMDFIMSTGESDLTNQLLPSKHSFFIR
ESRSGVRHTNVLLRGSVFRTFSINFFTYGFPVSLFALSFWSFHFTSVCAFGLLAYVGYVV
YAFPSLFHLHRLNGLLLVFILLWAVSTYIFNVAFAFLDLQLGKDMEIWEMVGLWHYPIPG
FFLLAQFGLGILVAVGNLVNNTVFLHLSDEDGQSSNENSTVEVNEETKVLIVATIAWGLR
KSSRAIMLALIFLIAMKPGFIHAVYMVFFLIYLLSHNISRKTCQSLILLCEVHFALLYIL
QLNLISRTLEEKGSISMEILSQIGLLEHDHSWDSLEIAMLACCCAVHKHGFDVLFSFSAM
VQHTPNPPIGFSILKAGLNKSVLLSIYSSSTTRDCNDNRSHERRIASFLSAIGQQFLSMY
RSCGTYIAFMTILLAVYLVTPNYISFGYIFLLLVWIIGRQLVEKTKRRLWFPLKVYSLLV
FIFIYSLSICSKFEMWLSRVIDLYPNLGYNPEASLLKNVWESLAIVIVMQLYSYERRQSK
YNRLDAPHPVQSGILGFIRRLLIWHSQKILFVAVFYASLSPVSAFGFVYLLGLVICSTLP
KVSQIPSKLFLVYTGFLVMTEYLFQMWGKQAEMFPGQKHSDLSLFLGFSVFKPGFSGIES
GLRGKVLVIAACTLQYNVFHWLDKMPSTLLSMGKWEEPCPLFISEEETLPVVSVSSEVSK
PSSDSSSLSVKKRGVTSYSWPSFNFGLSQESHPVPSETAESGGSGSRKFSFENIWGSTKE
SHKWNKKRILALKKERFETQKTTLKIYFKFWVENMFNLFGLEINMIALLLASFALSNAIS
MLYIAALAACVLLNRHIIWKLWPVFIFLFASILILEYLALWKNMVSLSPDNPSDTNFHCH
DCWRSSDLYFHYCRNCWLGLVVDDPRTLISYYIVFMLACFKLRADHSSSFSGPFTYHQMM
SQRKNIFVWRDLSFETKSMWTFLDYLRLYCYCHLLDLVLALILITGTLEYDILHLGYLCF
ALIFFRMRLKILKKKNEIFKFLRIYNFSIIVLSLAYQSPFVGDSSAGRHKTIDYIYEVIG
FYKYDYGFRITSRSSLVEIIIFMLVSLQSYMFSSHDFDNVSRYLEAEQIGAIVHEQEKKS
AWKTAQLKHIREAEESKRQRNLQVEKIKSEMLNLQTQLHSMSSNTNFDEASHCIEGLRRR
STSLNSNRDTGAPDKGEGILRKQEQSFCTDLIFPSDLHDFPATESPSAIKNTEHPMEYSL
SEITELGEDSADGALVDSEKREEVKSQVKESPLISAVQLIGDGVSQVQSIGNQAVTNLVS
FLNIEHEDSDSNEQYSSENGIHDTIEGQNLRHTCLNHSSSFQSDKSRTTSDAASLQIGRI
FRYIWSQMRSNNDVVCYCCFVLVFLWNFSLLSMAYLAALFLYALCVNNGPSYMFWVIMLI
YTEVYISVQYLYQIIIQHSGLSIQSSILHELGFPGHKIMSSFVISSLPLFLVYLCTLIQS
FITAKDGEWMSFTEFNFFKRRILHRREVFVTSSWSERAQKLLQPIMNVMNMIIRGFSRYW
KSLTQGAESPPYFVQLSMDVHLWPEDGIQPEKIESGINQLLKMVHDKRCNGKNPNLCPSA
SRVRVQSIERSQENPSLALAVFEVVYASPLTECTPTEWYKSLTPAADVAKEIREAQHAGF
VEEIGFPYPVLSIIGGGKREIDLYAYIFGADLTVFFLVAMFYQSVIKNKSEFLDVYQLED
QFPKEFVFILMIIFFLIVLDRVIYLWSFAMGKVIFYFFNLILFTYSVTEYAWHMEPSHWH
AGGLALRAIYFTKAVSLALQAIQIRYGIPHKSTLCRQFLTSKISRVNYFGYRLYRALPFL
YELRCVLDWSCTTTSLTMYDWLKLEDIHASLFLVKCDTVLNRASHKQGEKQTKMTKFCNG
ICLFFVLICVIWAPMLIYSSGNPTNVANLIKDCSVQVDIKTGAGRLTLYQTTLCEKIPWD
MLDGGADLDPKGYLDAFEKSDVQLICCQAEASSLWLIPHVVQNRFIQSLDWDMGMDITFT
WLLTRGRPKGKEVVKYDTDVDHLNLPKQSDVQEVLNGTANSFRINNVYSRYFRVTGSGDV
RPLGQEANAVSADLVLNRGNFEWWSFHDTNPSNLSGCGGLTGPMAIIASEETPPQGILGD
TLSKFSIWGLYITFVLAVGRFIRLQCSDLRMRIPFENLPSCDRLIAICEDIYAARSEGEL
GVEEILYWTLVKIYRSPHMLLEYTKVD
NT seq
7464 nt
NT seq
+upstream
nt +downstream
nt
atggggagtttccttggtggggttgtattacccttgctgtttttaacagctgctctactc
agttggagtttgatatctcttgttgatttgattgtttttcttctcatccaattcacaaca
ccaaaaacaggttttcgttttcgaaggcaacatctattattgtggtttgttgttatcttt
tccatacttgttattctttcgcaagtgacatttcttattatttgggcggttgaggggggt
aaatggagtatggaagatgcttggtgggtgaaggtaattggattcatgagagtcatgtcc
tggagatttccctctgcgatttatttcttggtcatacaattactagtggtttttgttgct
ttggtggagatttttgggaacagatttggtcctactccgtggcgagattcatgttggggc
catctcttttcagcggttgaacatttaggttctcatctgagggttgcttcttgcttgctg
tttcctgctgttcagctggttgtgggaattagccatccttcttggatttctctaccattt
tttattggtagctgtgttggtcttgtagattggtctctaacaagcaattttctgggcctt
ttcaggtggtggaggcctcttcagctgtatgctggcttcaacattgtccttctttatgtg
tatcagctccctatagggctccctaagcttttccagagaatagctgatttcattggtctg
tacaaaatatctggaaaatctgactggccagaaatatgttctgctctttctcttgtagtt
ttctacatcgtgctatcctacatcaaatgtgatttggaggaaatggatttcattatgtca
acgggggagagtgacttgaccaatcaacttcttccctcgaagcactcattttttattcgt
gaatcaagatctggtgtaaggcataccaatgttctattaaggggatcagtctttcggaca
tttagtatcaattttttcacgtatggtttcccggtttccttgtttgccctttctttttgg
agttttcatttcacaagtgtatgtgcatttggattactcgcatatgtcggctatgttgtg
tatgccttcccttccttgttccatctgcatcggctaaatggactgctgcttgtctttatt
ctcttgtgggctgttagcacgtatattttcaatgtggcatttgcattcctggacctgcaa
cttgggaaggacatggagatttgggagatggttgggctgtggcattatcctatacctggt
ttctttctgcttgcacagtttggtcttggaattctggttgctgtgggtaatcttgttaac
aacactgttttcctccacttatctgatgaggatgggcaatcttcaaatgagaactctact
gtagaagtgaacgaagagaccaaggtattgattgttgctacaattgcatggggcctgcgt
aaaagctctcgtgctatcatgctggcgcttatattcctcattgccatgaaaccgggtttc
atccatgctgtatatatggtattcttcttgatatatcttttgagccacaacatcagcagg
aagacatgtcaatccctgattctcctatgtgaggttcattttgcactgttgtacattctt
cagcttaatcttatctccagaacgttggaggaaaaaggctctattagtatggaaattcta
tcgcagataggtctccttgagcacgaccattcctgggattcattagaaatagctatgctt
gcatgctgctgtgcagttcataagcatggttttgatgtgctgttttcgttctcagcaatg
gtgcagcacaccccaaaccctccgattggattcagcatcttgaaagctggtttgaataaa
tcagttctattgtcaatttacagctcttcaactaccagagactgcaatgataatcgttct
catgagagaaggatagcatcatttctcagtgcaatagggcagcagtttctatctatgtat
cgatcctgtggaacgtatatagcttttatgacaattcttctcgcagtatacctggtgaca
cctaattatatatcatttgggtacattttccttctccttgtttggatcattggaagacaa
cttgttgagaagacaaaaagacgtttatggtttccattaaaagtgtattcacttctggtg
tttatattcatatatagcttgagcatttgctccaaattcgagatgtggttgtctagagtt
atagatctttatcctaatttgggttataacccagaagcttcattgttgaaaaatgtttgg
gaatctctagcaattgtgattgtgatgcaactttatagttatgagaggaggcagagtaag
tataacagattagatgctccccatcctgtgcaatctggaatacttgggtttattagacgg
cttctgatttggcacagccagaagatcttgtttgttgcagtattctatgcatctttatct
ccagttagtgcctttggttttgtgtatcttctcggtctagtcatatgttcaactttacct
aaagtttctcagatcccatcaaaattgttcttagtctacactggatttttagtgatgact
gagtatctgtttcagatgtggggtaaacaggctgagatgtttcctggccaaaagcactct
gatttgtccctttttttgggcttctctgtatttaagcctgggttttctggaatagagtca
ggtttgagggggaaagtactggtgatcgctgcatgtacccttcaatacaatgtttttcat
tggttggacaagatgccaagtactcttctaagtatggggaaatgggaagagccttgccca
ctgtttatctcagaagaagagaccctgcctgttgtttcggtttctagtgaggtgagtaag
ccatcatcagattccagctctctgtctgtaaaaaagaggggggtgacaagctattcatgg
ccatcctttaactttggtctgtctcaagaatctcatccagtgccttctgaaacggctgaa
tctggaggtagtggctctagaaagttttcatttgagaatatctggggaagcactaaggag
agtcataagtggaacaagaagcggattcttgccttgaagaaggagagatttgaaacacag
aagactacattgaaaatatatttcaagttttgggtggagaatatgttcaatctgtttggc
ctcgagataaacatgattgcattgcttcttgccagttttgctttgtcaaatgctatttct
atgctatatattgcagctctagctgcttgtgttcttctgaatcggcatattatatggaag
ttatggcccgtatttatcttcttgtttgcttccattctcatccttgagtacttagccctc
tggaagaatatggtttctttgagtccagacaacccaagtgatactaattttcattgccat
gactgctggagaagctctgatttatatttccattattgcagaaactgttggctgggactg
gttgttgatgatcctcgaacgcttatcagctattatatagtcttcatgcttgcatgtttc
aaacttcgtgctgatcactcgtccagtttctcagggccatttacatatcatcaaatgatg
tctcaacgtaagaatatatttgtttggagagatctttcatttgaaactaaaagcatgtgg
actttccttgactacctgaggctttactgttattgccatcttttggatcttgtgctggct
ttgattttgattactggaaccctcgagtatgacattctgcaccttgggtacctatgtttt
gctctgattttctttcggatgagactcaaaatactaaagaagaagaatgaaattttcaag
ttcttgcgcatatacaacttctcaatcattgttctttctcttgcctatcaatctcctttt
gtgggggattccagtgctgggaggcataaaacaatagattacatatatgaggtgattgga
ttttacaaatatgattatgggtttaggattacttcaagatcttcactggttgagattatc
atatttatgctggtatccctgcagtcatatatgttttcctcccatgacttcgataacgtg
tcacggtatcttgaagcagagcaaataggtgccattgtacatgagcaagagaaaaaaagt
gcatggaaaactgcacagttaaagcatattcgggaagctgaggagagcaaacgccagcgt
aacttgcaagtagagaaaattaaatctgagatgctcaacctacaaacccagcttcatagc
atgagctctaatacaaattttgatgaagcttctcattgtattgaaggtttaaggaggaga
agtacttctcttaattcaaatagggacactggggcccctgataaaggggaaggcattctt
aggaaacaagagcagagtttctgtacagacttgatattcccttctgacttgcatgatttt
cctgctacggagagtccatctgcgatcaagaatacagagcatccaatggaatattctctt
tctgagatcactgagcttggcgaggattctgctgatggagccttagttgactcagaaaaa
agagaggaagttaaaagtcaagtaaaggaaagcccgttaatttctgcagtgcagctgata
ggtgatggtgtttcccaggtgcaatccattggaaatcaggcagttaccaacctggtgagc
ttcttgaacatagagcacgaagattcagattcaaatgaacaatattcttctgagaatggg
atacatgacacgattgagggtcaaaatttgaggcacacatgtttgaaccattcatcttct
tttcagtctgataagagcagaaccacatccgatgctgccagtctgcagattggaaggatc
ttccgttacatatggtcccagatgcgatccaataatgatgttgtgtgttattgttgcttt
gttctcgtctttctttggaactttagtttgctctctatggcctaccttgcagccctcttc
ttgtatgctctctgtgtgaataacggcccaagttatatgttctgggttattatgcttatc
tacacagaagtatatatttcggttcagtacctttatcaaattatcattcaacactctggg
ttgagcatccaatcaagcatacttcatgagctagggtttcctgggcataaaattatgtca
tcttttgttatcagctcattgcctcttttcttagtctacttatgtaccctcatacagagc
tttataactgcaaaggatggtgagtggatgtcctttacagaattcaatttttttaagagg
agaattctccataggagagaggtgtttgtgacttccagctggagtgagagagcacagaag
ctgcttcaaccaataatgaatgtgatgaatatgataattaggggcttctctaggtactgg
aaatcactaacacaaggagcagaatctcctccctactttgttcagttgtctatggatgtc
cacttgtggccagaagatgggattcagccagagaagatcgagtctggaataaatcaattg
cttaagatggttcatgataaaagatgcaatggaaaaaaccctaatctttgcccgtctgct
agtagggttcgcgttcaaagcattgaaagaagccaagaaaacccaagtctggccttggct
gtttttgaggtggtatatgcctcccctttgacagaatgtacaccaacagaatggtacaag
tctctgactcctgcagctgatgtagcaaaggagattcgtgaagcacagcatgcagggttt
gtagaagaaattggattcccataccctgtactttccataattgggggaggcaaaagagaa
attgatctgtatgcctatatatttggtgcagacttgactgttttcttcttagtcgccatg
ttctatcaatctgtgattaaaaataaaagtgaatttctagatgtgtatcagcttgaagat
caattcccaaaagagtttgtatttatcctaatgattatctttttcttgattgtgcttgat
cgcgtaatttacctttggtcatttgccatgggaaaagtgatattctactttttcaacctc
atcctctttacatattcagttacagagtatgcttggcacatggagccttctcattggcat
gcaggaggattagcacttcgtgcaatatattttacaaaggcagtttcactggcactccag
gctatacagatccgatatgggattcctcataaaagcactttgtgtcggcaatttttgaca
agcaaaatttcaagagttaattattttggttaccgactttatcgtgctctgccatttctt
tatgaattgcgatgtgtacttgactggtcgtgcacaaccacatctttgaccatgtatgac
tggctgaagctggaggacatacatgcaagcttgttccttgtcaaatgtgatacagtgttg
aatagagcttctcacaaacagggagagaagcaaacaaaaatgaccaaattttgcaacgga
atatgtctattcttcgtactaatctgtgttatctgggctccaatgctgatttacagcagt
ggtaacccaacaaatgttgcaaacctcatcaaagattgcagtgttcaggttgatattaag
acgggggctggaaggttaaccttataccaaaccactctatgtgaaaaaatcccatgggat
atgcttgatggtggtgctgatcttgaccccaaaggttatttggatgcatttgagaagagt
gatgtccaattaatatgctgtcaagctgaggcaagtagtttgtggcttattccccatgtg
gttcagaacagattcattcaatcccttgactgggatatgggaatggatattacttttact
tggctgcttacccgaggtaggccaaaaggcaaggaagttgtgaaatatgatacagatgtt
gatcatttgaatcttccaaaacaatcagatgtccaggaagttctcaatggtactgccaac
agcttccggataaacaatgtttattcgagatactttcgagttactggttctggtgatgtc
agacctttaggacaagaggcaaatgcagtcagtgctgatcttgttctaaatcgtgggaat
tttgaatggtggtccttccacgatactaatccttcgaatctaagtggatgtggagggttg
acaggacccatggccatcattgcatctgaggaaacccctccacagggtattcttggtgac
actcttagcaagttcagcatctggggtctctacattacctttgtgcttgcagttggccgg
tttatcagactgcagtgctctgacttaagaatgagaatcccctttgagaaccttccttct
tgcgacaggttgatagccatctgtgaggatatatatgctgcaaggtcagagggtgagctt
ggagtggaggagattctctactggactctggtgaagatctacaggtctccacacatgctg
ctcgaatacacaaaggtcgactag
DBGET
integrated database retrieval system
