Vitis riparia (riverbank grape): 117917507
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Entry
117917507 CDS
T07274
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00040
Pentose and glucuronate interconversions
vri01100
Metabolic pathways
Module
vri_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
117917507
Enzymes [BR:
vri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
117917507
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
FANCL_d1
Motif
Other DBs
NCBI-GeneID:
117917507
NCBI-ProteinID:
XP_034689693
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Position
7:complement(9273646..>9278387)
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AA seq
390 aa
AA seq
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IAVELVPNVNLQQVEFAPHNIFVSFGAKGDGLTDSTKAFTDAWAAACASIASTTSIIFVP
RGRYLLRPAVFAGQCTRTRIIILIKGTLVAPSDYRILGKADSWFSFEGVSGVSILGGALD
ARGHALWACKAAGNQQHCPSGATTLSFTNSNNIMIKGVLSVNSQMFHIVINGCNNVRLQG
ISIKAPESSPNTDGIHVQLSANIAIVRSIIRTGDDCISIGPGTRNLWIERVKCGPGHGIS
IGSLAKDMEEEGVENVTVRRAVFTGTQNGLRIKSWPRPSKGFVNGVHFRGAIMDNVQYPI
VIDQNYCPGDEDCPSQESGVKVSNVTYKEIEGTSATEVAIKFHCSATDPCTFLRLEDVKL
SYVNDERVAQSFCRYANGKAYGLVQPNSCF
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atagctgtggagctggttcccaatgtaaacttgcaacaagttgagtttgctccccacaac
atttttgttagttttggagctaaaggcgatggcctaacggactccaccaaagcattcact
gatgcatgggctgcagcatgtgcctccatcgcttccaccacctccatcatatttgtacca
agaggacgctatttgcttcgccctgctgtgtttgcaggccaatgcacaagaacccgtatc
atcattctcattaaaggcaccctggtggctccatctgactaccgcattctcgggaaagcg
gacagttggttcagctttgaaggagttagtggcgtttccatcttgggaggggccctggac
gccagaggacatgccttgtgggcttgcaaagctgccggaaaccaacagcattgccccagt
ggggccacgaccctcagttttaccaactccaacaacattatgataaagggagtgctatca
gtaaacagtcagatgttccacattgtcataaatggctgcaacaatgtgcgccttcaagga
atcagcatcaaagcacccgaaagcagcccaaacacagacggcattcacgtccagttatcg
gccaacatcgccattgtccgctccatcatcagaactggtgatgactgcatatcaatcggt
ccaggcacccgtaacctgtggatagaacgtgtgaaatgcggtcctggtcacggcattagc
ataggaagcctagccaaggacatggaagaagaaggggtggaaaatgtgacggttaggagg
gcagtttttacaggtactcaaaatgggcttaggattaagagttggcccaggcccagcaaa
ggattcgttaatggggtccatttcagaggagccatcatggacaatgtccaatatcccatt
gttatagaccaaaactactgtcctggtgatgaagattgcccttctcaggagtcgggcgta
aaagtgagtaatgtgacatacaaggaaattgaagggacatcggcgactgaggttgcaatc
aaattccattgtagtgctacggatccatgcacatttctaagactagaagatgtgaaacta
tcttatgtaaatgatgagagagtggctcaatccttttgtagatatgcaaatggaaaggca
tatggcttggtccaaccaaatagttgtttctaa
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