KEGG   Vitis riparia (riverbank grape): 117917507
Entry
117917507         CDS       T07274                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri00040  Pentose and glucuronate interconversions
vri01100  Metabolic pathways
Module
vri_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:vri00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    117917507
Enzymes [BR:vri01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     117917507
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim Beta_helix FANCL_d1
Other DBs
NCBI-GeneID: 117917507
NCBI-ProteinID: XP_034689693
LinkDB
Position
7:complement(9273646..>9278387)
AA seq 390 aa
IAVELVPNVNLQQVEFAPHNIFVSFGAKGDGLTDSTKAFTDAWAAACASIASTTSIIFVP
RGRYLLRPAVFAGQCTRTRIIILIKGTLVAPSDYRILGKADSWFSFEGVSGVSILGGALD
ARGHALWACKAAGNQQHCPSGATTLSFTNSNNIMIKGVLSVNSQMFHIVINGCNNVRLQG
ISIKAPESSPNTDGIHVQLSANIAIVRSIIRTGDDCISIGPGTRNLWIERVKCGPGHGIS
IGSLAKDMEEEGVENVTVRRAVFTGTQNGLRIKSWPRPSKGFVNGVHFRGAIMDNVQYPI
VIDQNYCPGDEDCPSQESGVKVSNVTYKEIEGTSATEVAIKFHCSATDPCTFLRLEDVKL
SYVNDERVAQSFCRYANGKAYGLVQPNSCF
NT seq 1173 nt   +upstreamnt  +downstreamnt
atagctgtggagctggttcccaatgtaaacttgcaacaagttgagtttgctccccacaac
atttttgttagttttggagctaaaggcgatggcctaacggactccaccaaagcattcact
gatgcatgggctgcagcatgtgcctccatcgcttccaccacctccatcatatttgtacca
agaggacgctatttgcttcgccctgctgtgtttgcaggccaatgcacaagaacccgtatc
atcattctcattaaaggcaccctggtggctccatctgactaccgcattctcgggaaagcg
gacagttggttcagctttgaaggagttagtggcgtttccatcttgggaggggccctggac
gccagaggacatgccttgtgggcttgcaaagctgccggaaaccaacagcattgccccagt
ggggccacgaccctcagttttaccaactccaacaacattatgataaagggagtgctatca
gtaaacagtcagatgttccacattgtcataaatggctgcaacaatgtgcgccttcaagga
atcagcatcaaagcacccgaaagcagcccaaacacagacggcattcacgtccagttatcg
gccaacatcgccattgtccgctccatcatcagaactggtgatgactgcatatcaatcggt
ccaggcacccgtaacctgtggatagaacgtgtgaaatgcggtcctggtcacggcattagc
ataggaagcctagccaaggacatggaagaagaaggggtggaaaatgtgacggttaggagg
gcagtttttacaggtactcaaaatgggcttaggattaagagttggcccaggcccagcaaa
ggattcgttaatggggtccatttcagaggagccatcatggacaatgtccaatatcccatt
gttatagaccaaaactactgtcctggtgatgaagattgcccttctcaggagtcgggcgta
aaagtgagtaatgtgacatacaaggaaattgaagggacatcggcgactgaggttgcaatc
aaattccattgtagtgctacggatccatgcacatttctaagactagaagatgtgaaacta
tcttatgtaaatgatgagagagtggctcaatccttttgtagatatgcaaatggaaaggca
tatggcttggtccaaccaaatagttgtttctaa

DBGET integrated database retrieval system