Vitis riparia (riverbank grape): 117917624
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Entry
117917624 CDS
T07274
Name
(RefSeq) probable methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00450
Selenocompound metabolism
vri00970
Aminoacyl-tRNA biosynthesis
vri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
117917624
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117917624
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vri01007
]
117917624
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vri03016
]
117917624
Enzymes [BR:
vri01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
117917624
Amino acid related enzymes [BR:
vri01007
]
Aminoacyl-tRNA synthetase
Class I (U)
117917624
Transfer RNA biogenesis [BR:
vri03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
117917624
Prokaryotic type
Other AARSs
117917624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
tRNA-synt_1e
CoV_peptidase
Motif
Other DBs
NCBI-GeneID:
117917624
NCBI-ProteinID:
XP_034689846
LinkDB
All DBs
Position
7:15936006..15943833
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AA seq
805 aa
AA seq
DB search
MGDENEKEGGRKKVPVEGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYN
VLYICGTDEYGTATETKAMEENCSPQQICDKYHKIHKEVYDWFDISFDEFGRTSTPQHTE
VCQEIFKKLMENNWLSENRMQQLYCETCQRFLADRLVEGTCPTLDCNYDSARGDQCEKCG
KLLNPTELKDPRCKVCQSTPQIRDTDHLFLELPLLKDKLEEYINNMSIAGCWSQNAIQAT
YAWLKEGLRSRCITRDLKWGVPVPHEKYKDKVFYVWFDAPIGYVSITACYTPEWEKWWKN
PENVDLYQFMGKDNVPFHTVMFPSTLIGTGENWTLMKSISVTEYLNYEAGKFSKSKGVGV
FGNDVKDTKIPAEVWRYYLLTNRPEVSDSLFTWVDLQAKLNTELLNNLGNFINRVLSFIA
KAPGLGYGSSIPDAPGAESHYLTKALAEKVGAYLEQYIEAMEKVKLKQGLKIGMSISSEG
NGYLQESQFWKLYKEDRASCSIVMRTSVGLVYLLSCLLEPFMPSFSLEVLKQLNLPPETR
LSLCDENGDLERARKPWELLPAGHKIGTPEPLFNELRDEDVEFFREKFAGSQADRVVKAE
AEAKKIVEQLKEAKISDGNGKKQKSTKSGSEVQIKKSCKSEVSISRLDIRVGLIKEAQKH
PDADSLYVKEIDVGEVATRTVVSGLVKHVPLEEMLNRKVCVLCNLKPATMRGVNSQAMVL
TASDKNGTKVELVEPPHSASVGERVTFPGFEGKPDRVLNPKKKIWETLQSDLHTDAQLFA
FYKDVPFTTSAGVCKVKSVSNGVIS
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgaaaatgaaaaagaaggaggaaggaagaaggtgccggtagagggaaagcgg
aacatcctcataaccagcgctctgccttacgtcaacaacgttcctcatctcggcaacatc
attggctgtgttttaagtgctgatgtattcgcccgttactgccgccttcgtggctacaat
gtgttatacatatgtgggactgatgagtatgggacagcaacagagacaaaggccatggag
gagaattgctcccctcaacaaatttgtgacaaataccacaaaattcacaaagaagtttac
gattggttcgacatcagttttgatgagtttgggcggacatcaactccccaacacactgaa
gtttgccaagaaatttttaagaaactgatggaaaacaattggctttccgagaacagaatg
caacagctttattgcgagacatgtcaacgtttcttagctgatcggcttgtggaaggcacc
tgcccaacactagattgtaattacgactctgctcgtggggatcagtgcgaaaagtgtgga
aagctattgaatccaactgaactgaaagatcctagatgcaaggtatgccagtccactcca
caaatccgtgatacagaccacttgtttctcgagctcccattgctaaaggataaattggaa
gaatatatcaataacatgtccattgcaggatgctggagccaaaatgctatccaagctaca
tatgcatggcttaaagaaggacttagatcccgctgtattaccagggatctcaagtggggg
gttcctgttccacatgaaaaatataaggacaaggttttctatgtctggtttgatgcacca
attggttatgtctcaatcactgcatgctatacacctgagtgggaaaagtggtggaagaac
cccgaaaatgtggatctgtaccagtttatgggcaaggataatgtgcccttccacactgtg
atgttcccatctacacttattggaactggagaaaactggacattgatgaagagcattagt
gttacagaatacttaaactatgaagcaggaaagttctccaagagcaaaggagtaggagtt
tttggcaatgatgtgaaagacacaaaaattcctgcagaagtgtggcgatattacttgcta
actaacaggccagaagtgtcagactcattatttacatgggtagacttgcaagcaaagcta
aatactgagttgctgaataatctgggcaatttcatcaatcgagtattgagcttcatcgcc
aaagctccaggattaggatatgggtctagcattcctgatgctccaggtgcagaatcacat
tatttgaccaaggcattagcagaaaaagttggcgcatacttagagcaatatatagaagct
atggagaaggttaaactaaagcaaggactgaaaattggaatgagcatctccagtgagggg
aatgggtatctgcaagaaagccaattctggaaactttacaaggaagatcgagcttcctgt
tctattgttatgagaacttcagtggggctggtttatcttctctcatgtttgttagaacct
ttcatgccatcgttttcacttgaggtattaaagcagctcaatttgcctcctgaaacacgg
ctttctctttgtgatgaaaatggagatcttgagagggcaagaaaaccttgggagcttctg
cctgctggtcacaagatagggactccagaacctttatttaacgaattgagggatgaagat
gtggagtttttcagggagaagtttgccggaagtcaagcagatagggtcgtgaaggcagaa
gctgaagcaaagaagatagttgaacaattgaaggaagcaaaaatttcagatggtaatgga
aagaaacagaagtcaaccaagtctggatcagaagtccaaataaagaaaagctgtaaatca
gaagtttcaatttctagacttgatatccgtgttggcctcatcaaggaagctcagaaacat
ccggatgctgactccctttatgtgaaagagatagatgttggtgaagtagcaacccgaacc
gttgttagtggccttgtcaaacatgtacctcttgaagaaatgctgaaccgaaaagtctgt
gtcctttgcaacctgaagccagcaaccatgcggggagtcaattcacaagcaatggttctt
actgcttccgacaagaatggcaccaaggttgaattggtggaaccaccccattctgcttca
gtaggagaaagggtgacatttcctggttttgaaggcaaaccggaccgtgttctcaacccc
aagaaaaagatatgggaaacactgcaatcggacctgcacactgacgcacaactgtttgct
ttctacaaagacgtgcctttcacaacatcagcaggcgtttgcaaggttaagtcagtatct
aatggagtgataagctaa
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