Vitis riparia (riverbank grape): 117917627
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Entry
117917627 CDS
T07274
Name
(RefSeq) cysteine protease ATG4-like isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04136
Autophagy - other
vri04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
117917627
04136 Autophagy - other
117917627
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vri01002
]
117917627
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117917627
03029 Mitochondrial biogenesis [BR:
vri03029
]
117917627
Peptidases and inhibitors [BR:
vri01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
117917627
Membrane trafficking [BR:
vri04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
117917627
Mitochondrial biogenesis [BR:
vri03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117917627
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
117917627
NCBI-ProteinID:
XP_034689852
LinkDB
All DBs
Position
7:complement(9477425..9486762)
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AA seq
487 aa
AA seq
DB search
MKGFCEKAVASKFSCKTKSDSSNSEPQSSDTKLSKVSLWSSVFASAFSVFETNSESSPSA
SEKKAIDNSRNNGWTTTVRRVVTGVSMRRIQERVLGTSKTGISSSTSDIWLLGLCYKISQ
EESSNHASSSNGLAEFEQDFSSRILMTYRKGFEAIGDSKLTSDVNWGCMLRSSQMLVAQA
LLLHRMGRSWRKTSHKPMDQDYIEILHHFGDSKASAFSIHNILQAGKAYGLAAGSWVGPY
AMCRSWETLARSKREETDLEGQSLPMAIYIVSGDEDGERGGAPVVYIEEASRHCLEFSKG
QVDWTPILLLVPLVLGLEKVNPRYIPSLAATFTFPQSLGILGGKPGASTYIVGVQDEKAF
YLDPHEAQSVVDIRRENLEADTSSYHCNCSSIVRHICLDSIDPSLAIGFYCRDKDDFDDF
CIRASKLADESNGAPLFTVAHIHSLPKPISCSDGMDDCSGFREDDSFDVVSKKGAEGYEH
EDDWQLL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtttttgtgagaaggctgttgcttcaaaattttcttgtaaaactaaatctgat
tcttccaattcagagccacaatcaagcgacactaagttgtcgaaggtatccttgtggtca
agcgtttttgcctctgctttttcagtttttgagacaaacagtgagtcatcaccatcagca
agtgaaaagaaggccattgataatagtagaaacaatgggtggacaaccactgtgaggaga
gttgtgactggtgtctcaatgaggagaattcaagagcgtgtgttagggacaagcaagact
ggaatttctagctcaactagtgacatatggcttttaggtctgtgctacaagatttcacag
gaagagtcttctaaccatgcctctagtagcaatggattagctgaatttgaacaagatttt
tcttcaaggattttgatgacatatcgaaaaggttttgaggctattggggattcaaagtta
actagtgatgtgaattggggttgcatgcttcgaagtagtcagatgcttgttgcgcaggca
ttgcttttacatcgaatgggaagatcttggagaaaaacatcacataagccaatggaccaa
gattatattgagatcctgcaccattttggtgattctaaggcatcagctttctcaatccac
aatattcttcaagctggaaaggcttatggccttgctgctggttcatgggtgggtccatat
gccatgtgtcgctcatgggaaacactagcacgctctaagagagaggagactgaccttgaa
ggccagtcattacctatggccatttatattgtttctggtgatgaggatggagaaagaggt
ggtgctcctgttgtttatatcgaagaagcatctagacattgtttggagttttcaaaaggc
caggttgactggacaccaattcttctattggttcccttggttcttggattggaaaaggtc
aatcccaggtatattccatcattggcagcaactttcacctttccccagagccttggcatc
ttgggcgggaaacctggtgcttccacttacattgttggtgtgcaagatgaaaaagcattt
tacctcgacccgcatgaagcccagtcggtagtcgatattaggagagaaaatctagaggct
gatacatcatcataccactgcaattgctccagtatcgtacgacacatatgccttgactcg
attgatccatccttggcgattgggttctactgccgagacaaagatgattttgatgatttt
tgtatccgggcttccaagctagcagatgaatcaaatggagctccactatttactgtagca
cacatccacagtttgccaaagccaatcagttgcagtgacggaatggatgattgcagtggc
tttagagaggatgattcctttgatgtggtgagcaagaaaggtgcagaaggctatgaacac
gaggatgactggcaacttctttga
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