Vitis riparia (riverbank grape): 117917886
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Entry
117917886 CDS
T07274
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117917886
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vri01009
]
117917886
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117917886
03036 Chromosome and associated proteins [BR:
vri03036
]
117917886
Protein phosphatases and associated proteins [BR:
vri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
117917886
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
117917886
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
117917886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EF3_N
Vac14_Fab1_bd
PDS5
HEAT_EZ
Adaptin_N
CLASP_N
Cnd1
TPR_TNPO3_IPO13_3rd
GNC1_N
Motif
Other DBs
NCBI-GeneID:
117917886
NCBI-ProteinID:
XP_034690237
LinkDB
All DBs
Position
1:complement(2971533..2983135)
Genome browser
AA seq
587 aa
AA seq
DB search
MAMVDEPLYPIAVLIDELKNADIQLRLNSIRRLSTIARALGEERTRNELIPFLSENNDDD
DEVLLAMTEELGVFIPYVGGLEHACVLLPPLETLCTVEETRVRDKAVESLCRIGSQMKEN
DLINWFIPLVKRLASGEWFTARVSACGLFHIAYPSAPEMSKMELRAIYSQLSQDDMPMVR
RSAASSLWKFSATVEPVHLKNDIMTIFENLTQDDQDSVRLLVVEGCATLGKLLEPQECIA
RILPVIISFSQDRSWRVRYMVADQLYELCHAVGPEPTRTDLVPAYMRLLRDNEAEVRIAA
AGKVTKFCQILNPELAIHHILPCVKELSLDSSQHVRSALASVLMGMAPVLGKDATIDQLL
PIFLSLLKDDFPDVRLNIISKLDQINQVIGTDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGIKFFDDELGALCMQWLQDKVYSIRDAAANNLKRLAEEFGPDWAMQHLIPQV
LEMINNSHYLYRMTVLRAISLLAPAMGAEITYSKLLPVVISASNDRVPNVKFNVAKVLQS
LIPIVDHSVVEKTIRPCLVELSEDPDVDVRFSANQAIHVIDHVIMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctatggtggacgagccactttatccgatcgctgttctgatagatgagttgaaaaat
gctgacatccagctgcggttgaactcaattcgtcggctatccacaattgcacgtgcactg
ggggaggagcgaacccgaaatgaattgatcccatttcttagtgagaacaatgatgatgat
gatgaggtgcttcttgcaatgacagaagaattgggagtgttcattccttatgttggggga
ctggagcatgcctgtgttttgctaccacctttggaaactctttgcactgtggaggaaacc
cgtgtgagggataaagccgtggagtctttgtgtagaattggttctcaaatgaaggaaaat
gatttgattaactggtttattcctttggtgaagagactggcatctggtgaatggtttacc
gctcgagtttctgcatgtggactgtttcatattgcttacccaagtgccccagagatgtca
aagatggagttgcgggcaatatacagtcaattgagtcaagatgacatgcccatggtgagg
agatctgctgcatcaagcctgtggaagttttctgcaacagttgagcctgttcatttgaag
aatgacatcatgacaatatttgaaaatcttacacaggatgatcaagattcagtcaggtta
ttggttgttgagggttgtgccacactgggcaagttattggagccccaggaatgcattgca
cgtattctccctgttattatcagcttttctcaggacagatcttggcgtgttcgctacatg
gttgcagatcaattatatgagctttgtcatgctgtagggcctgaacctaccagaacggac
ttggttcccgcttatatgcggttacttcgagataatgaggctgaagtacgaatagcagct
gctggcaaagtaactaaattctgtcagatcttaaatccagaacttgcaattcatcatatt
cttccctgtgtaaaggaattgtcattagattcgtcccagcatgtccgctctgccttggct
tcagttttaatgggaatggctcccgtcttaggaaaggatgcaacaattgatcaacttctt
ccaatttttctttctcttttgaaggatgactttcctgatgtacgactaaatatcattagc
aagcttgatcaaataaatcaggttattggaactgatctattgtcccaatccctattaccg
gccattgttgagcttgcagaggatagacattggagggttcgacttgcaataatagagtat
attcctttgttggcaagtcagttgggtataaagtttttcgatgatgagcttggtgctctt
tgcatgcagtggctacaggataaggtttactccattcgtgatgctgctgctaacaactta
aagcgccttgcagaagaatttggtcctgactgggcaatgcagcacttaattccacaggtc
ttggagatgattaacaattcacactatttgtatcggatgactgttctacgggcaatttcc
ctacttgcccctgccatgggcgcagaaattacttattcgaaactgttgccggtggtcatc
agtgcatccaatgacagggtgcccaatgtcaaattcaatgttgccaaggtgctgcagtcc
ctgattcctatagttgatcattctgtggtggaaaagacgatccgaccatgtttggttgag
cttagtgaggacccagatgtagatgtccgcttttctgccaaccaagcaatccatgtgatt
gatcacgtcataatgtctagctag
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