KEGG   Vitis riparia (riverbank grape): 117917954
Entry
117917954         CDS       T07274                                 
Name
(RefSeq) coilin isoform X1
  KO
K13150  coilin
Organism
vri  Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:vri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vri03041]
    117917954
Spliceosome [BR:vri03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    117917954
SSDB
Motif
Pfam: Tudor_Coilin Coilin_N
Other DBs
NCBI-GeneID: 117917954
NCBI-ProteinID: XP_034690333
LinkDB
Position
1:complement(7206680..7216418)
AA seq 652 aa
MAMETVRVRVVLEDPDLLNKTQNSEGLRRSWLLLKPQHKTISDLSSYLLRIFNLHDSCPN
GLLISMDGFVLPSFESTCILKDKEIISVKRKGGAVIDLLEVGDETNCSEDEAIVENQHTH
RGVKLLANEEFDKETGGYESESEEDEPDQPEETVQVETASAGNAGSKKRKASRKLKSPKR
KKNKYTSLEKCPVVLEDVENGVCEEQTKSCDDCTVLPKKGSLKKHKSSKVDGKPDKARTL
NIDERSNDVDESSPNAKRCGELQENGSQGVEVANPPDGTQKYPSRSARRKKAKRKWLREL
AKVEKNEMHQRQSPEKEVQKNSLEHQQPDQNSDTDDAVIVPIVIRPGHIRFEPLGKDQTI
QQNQVSVETFQWNGTTSKKKGQKWGKEKMSCRRNDYKDFNQQHSETFAVEEGTPPKDPMD
FDKLPSLTSSPKEGDMIAYRLIELSSTWTPELSTFRVGKISSYDPESNKLILISVPEYPI
VAETRIDEDASALEPDPDTSLYREDGSLEIDFSSLIDVRIIKSGNSHLEKAVTARVEAPV
DTQDAVSGVKPNNKNSGLSTFLPGGELNITQVAVAGVEPNINRDMTAPPPENGKVNAWDE
IDKVLSAKKAQLSQEDGSSKKESSGRSPWSYKALRGSALGPTMSFLRAQNNL
NT seq 1959 nt   +upstreamnt  +downstreamnt
atggcaatggaaactgtaagggttcgtgtggtgttggaagatcccgatcttctgaacaag
acacagaattcagagggactgaggcggagttggcttctcctcaaaccccaacacaaaacc
atctccgacctctcttcctatctccttcgcatcttcaatctccacgattcttgccctaat
ggcctcctcatctctatggatggctttgttttgccctcttttgagtccacttgtatttta
aaggacaaggagatcattagtgtgaaaaggaaaggtggggcagtgattgatcttcttgag
gttggtgatgagacaaattgctctgaggatgaagcaatcgtggagaatcagcacacgcat
aggggagtgaagcttttggcgaatgaggagtttgacaaggagactggagggtatgaaagt
gaatctgaagaggatgaacctgatcaaccagaggaaacagtgcaagtggagactgcatcg
gccggaaatgcaggttccaagaaaagaaaagcatccaggaaacttaagagtccaaagagg
aagaaaaacaaatatacaagccttgaaaaatgcccagtggttctggaagatgttgaaaat
ggtgtatgtgaggagcagaccaaaagctgtgatgactgcactgtcctccctaagaagggt
agtctcaagaagcacaagtcatccaaggtggatggtaaaccagataaagctaggaccctc
aacattgatgaaagaagtaatgatgttgatgaatcttcgcccaatgcaaagaggtgtggt
gagcttcaagaaaatggcagtcagggtgtggaagttgccaatccacctgatggaacgcaa
aagtaccctagtagaagtgctcggcgtaaaaaggccaagcggaaatggctgcgggaacta
gctaaagttgaaaagaatgagatgcatcagagacaatcacctgaaaaagaggttcaaaag
aattctctagagcatcagcaacctgatcaaaatagtgatacagatgatgctgtcattgtt
cccatagtaattaggccagggcatattcgctttgagccccttggaaaagaccagactatc
cagcaaaatcaagtttcggtggaaacctttcagtggaacggaactaccagcaagaagaag
ggtcaaaaatggggtaaagagaaaatgtcttgtagaaggaatgattataaggatttcaac
caacaacattctgagacatttgctgttgaagaagggacccctccaaaggatcccatggac
tttgacaagcttccttccctcactagctcacctaaggaaggtgatatgattgcatatcgt
ttgattgagttatcatcaacctggacccctgagctatccaccttccgagttgggaaaata
tcatcatatgatcctgaatccaacaaacttatactgatatctgttcctgaataccctatt
gttgctgagacaaggatcgatgaagatgcatctgcactagaaccagatccagatacatcc
ctttacagggaagatggatctttagagatagatttttcatcgctcattgacgttcgaatt
atcaaatctggcaactcacatctggaaaaagcagtcactgctagagttgaagctcctgtg
gacactcaagatgctgtgtctggtgtgaaacccaacaataaaaacagtggactgtctact
tttcttccaggtggggagctcaatatcactcaagttgctgtagcaggagtggaacccaac
attaacagagatatgactgcccctcccccagaaaatggaaaagtaaatgcatgggatgaa
atcgataaggttttgagtgcaaagaaggcgcagctgtcccaggaagatggttctagtaag
aaggagagttcagggaggagtccatggtcatataaagcattgaggggcagtgcactgggc
ccaacaatgtctttcttaagagcacaaaataacttatga

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