Vitis riparia (riverbank grape): 117918109
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Entry
117918109 CDS
T07274
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117918109
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
117918109
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
117918109
NCBI-ProteinID:
XP_034690526
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Position
1:13372606..13383344
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AA seq
546 aa
AA seq
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MAGQRNDYGKRSHSQSDYGGNGGSKRRNPGDDKEQHGIGAEDTVYRYLCPVRKIGSIIGR
GGDIAKQLRSETKSNIRIGETMPGCDERVVTIYSSSEETNPFGDTGELVSPAQDALFRVH
DRIVAGELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRILKDEH
LPPCALSSDELLQIIGDASVVRKALHQLASRLHENPSRSQHLLLSSSPNMYQSGGTFMTP
NIDAPLVGVAPLMGSYGGYKGDTGDWSHSYYSARRDESSAKEFSLRLVCPTGNIGGVIGK
GGGIIKQIRQESGASIKVDSSSAEGDDCIIFISAKEFFEDPSPTIDAALRLQPRCSEKAE
RESSDSVVTTRLLVPSSRIGCLIGKGGAIISEMRSVTRANIRILSKENLPKVASEDDEMV
QITGELNVASNALLQVTLRLKANLFEREGAIAAIPPTLPYLPMSDMSDGSKYGSRDSQPR
ERGFSSYSGGYGSSDLAPSDRYGSYGGSQSGGGNGYGAYSGYSSSRSGSTGLSSQGRVSH
GKHHGY
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccagagaaatgactatggcaagagatcccattctcagtctgactatggtggt
aatggaggaagtaagagaagaaaccctggagatgacaaggagcagcatggtattggggca
gaagatactgtataccgttacctgtgccctgtgagaaagattggaagcatcattggtagg
ggtggagacattgcaaaacaactaagatctgaaactaaatcaaacattaggattggggaa
actatgccaggctgtgatgaacgtgttgtcaccatctatagttcaagtgaggaaactaat
ccatttggtgataccggtgagcttgtttcacctgcacaagatgctctcttcagggtgcat
gataggattgttgctggtgagctgcctgctgatgaggaacctgaagaggcacagcaagtt
actgttcggatgcttgtgccttctgatcagattggttgtgttattgggaaaggtgggcaa
gtgattcagaatatacgcagtgaaactcgtgctcagattcgcattctaaaagatgaacat
ctgccaccttgtgcccttagttctgatgagcttctgcagataattggggatgcatcagta
gtgagaaaggctcttcatcaactagcatctcgccttcatgagaatccatcacgatcccag
cacctgctgttgtcttcttcccccaacatgtatcaatctggtggtacgttcatgactcca
aatattgatgccccacttgtgggtgttgctccattgatgggttcttatgggggttacaaa
ggtgatacaggagattggtcgcactcttattactctgctcggagggatgaatcttctgca
aaggaattctctcttcgtttggtttgtccaactggaaatattggaggtgtgattggcaaa
ggtggcggtattatcaaacaaatcagacaggaatctggggcttccattaaagttgatagt
tcaagtgctgaaggagatgattgtattatttttatatcagcaaaggagttcttcgaagat
ccatctccaaccattgatgcagcactacggttgcaaccacgatgcagcgagaaagctgaa
agggaatctagtgattctgtggtcactacccgtctactcgttccaagctcacgaattgga
tgccttattggtaaaggtggggccatcatttctgagatgaggagtgttacaagagcaaac
atccgcattctatctaaggaaaatcttcccaaggttgcatctgaagatgatgagatggtg
cagatcactggagagctaaatgttgctagcaatgcccttttacaagtgacattgcggtta
aaagctaatttatttgaaagggagggtgcaatagctgcaattccaccaacccttccctac
cttcccatgtcagacatgtcagatggttcaaaatatggaagccgtgatagtcaaccgcgt
gaacgtgggttttcttcttattcaggtggatatggttctagtgatttggccccaagtgac
agatatgggagctatggtggttcacagagtggtggtgggaatggttatggagcatatagt
ggctattcttccagtcgatcgggtagcactgggttatctagtcagggccgtgtttcccat
gggaaacatcatggttattag
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