Vitis riparia (riverbank grape): 117918116
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Entry
117918116 CDS
T07274
Name
(RefSeq) FACT complex subunit SSRP1-like
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vri03000
]
117918116
03036 Chromosome and associated proteins [BR:
vri03036
]
117918116
Transcription factors [BR:
vri03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
117918116
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
117918116
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
CDC45
DUF6902
YL1
Motif
Other DBs
NCBI-GeneID:
117918116
NCBI-ProteinID:
XP_034690531
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All DBs
Position
7:18369979..18371786
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AA seq
599 aa
AA seq
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MSEGHLFNNISLGGRGGTNPGQLRVHPGGILWKKQGGGKAVEVAKSDIVGVTWMKVPRTN
QLGVRVKAGLYYKFTGFRDQDVTNLTTFFQHSCGINPEEKQLSVSGRNWGEVDLNGNILT
FLVGSKQAFEASLADVSQTQMQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDEIRPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPMSNQPHTFVVVTLDPPIRKGQTLYPHIVMQFETDYVVQSELSLS
EELLNTKYKDKLEPSYKGLIHEVFTLILRGLSGAKVTKPGKFRSCQDCYAVKSSLKAEDG
VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
RNEYHNLFDFISGKGLEIMNLRDVQTTDGVAAVLQNDDDDAVDPHLERIKNEAGGDESDE
EDEDFVLDKDDGGSPTDDSGEEESDASESGGEKEKPSKKESKKEPFASKASSSMKKPKDG
DEDGSKKRKQKKKKDPNAPKRAMSGFMFFSQTERKEGWAKLRKEVWIAKLSFDMHHILF
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagggtcatctctttaacaatatctctctcggcggtcgtggcggaacgaatcca
gggcagttgagggttcatccaggagggatattatggaaaaagcaaggaggtggaaaggct
gttgaggttgccaaatctgatattgttggggtgacttggatgaaagtcccaagaactaat
cagcttggtgttcgagttaaagctgggttatactacaaattcactggtttccgtgaccag
gatgtcactaatttgaccacttttttccaacattcttgcggaataaacccagaagagaag
cagctttctgtgagtggccgcaactggggagaagttgatttaaatggcaatatactgact
tttctggttggttcgaagcaagcatttgaagcatctttagcagatgtttcacagacacag
atgcaagggaaaaatgatgtcattttggagttccatgtggatgatacaactggggctaat
gagaaagattcattgatggagataagctttcacataccaaattccaatacccaatttgtt
ggtgatgaaattcgtcccccagctcaagtattccgtgataaaattatgtcaatggccgat
gttggtgctggaggtgaagaagcagttgttacatttgaggggattgcaattcttacacca
aggggacggtacagtgtggaactgcatttgtcattcctacgcctgcagggacaggctaac
gattttaaaattcaatacagcagcgtcgttcgccttttcttactacctatgtctaaccaa
ccacatacctttgttgttgtgacactggatccaccaatccgtaaagggcagactttgtat
ccacatattgtgatgcagtttgaaacagactatgtggttcaaagtgaattgtcattaagt
gaagaacttttgaataccaagtacaaggacaagttggagccttcatataagggactcatt
catgaagtcttcaccttgatattgcgtggcttgtctggtgccaaggtcacaaaaccaggg
aaattccggagctgtcaggattgttatgcagtgaagtcatcattgaaagctgaagatggt
gttttgtatccactagaaaagagcttcttctttttacccaagcctcctacccttattctt
catgaggagattgactatgtcgagtttgagaggcatgctgctggaggctcaaatatgcat
tactttgatcttcttataagactaaagactgagcaagaacatctcttccggaatattcag
aggaatgaataccataatctttttgactttatcagtgggaaaggcttggaaattatgaat
cttagagatgtccaaaccacagatggtgttgctgctgttcttcagaatgatgatgatgat
gctgttgacccacatcttgagcggattaagaatgaagctggtggagatgagagtgatgaa
gaggatgaagattttgttcttgacaaggacgatggaggctctcctactgatgattctggg
gaagaggaatctgatgctagtgaaagtggaggcgagaaagaaaagccttcgaaaaaggaa
tccaagaaagagccttttgcttctaaggcatcttcgtctatgaagaaacccaaagatgga
gatgaagatggttcaaagaagagaaaacagaagaagaaaaaagatccaaatgcgccaaag
agggctatgtctggtttcatgttcttttcacaaactgaaaggaaagaagggtgggctaaa
ttaaggaaggaagtgtggatagcaaagttgtcctttgacatgcaccacatcttgttttaa
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