Vitis riparia (riverbank grape): 117918268
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Entry
117918268 CDS
T07274
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vri03041
]
117918268
Spliceosome [BR:
vri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117918268
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GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_12
NRDE-2
TPR_19
TPR_16
TPR_MalT
UTP6_C
TPR_10
Motif
Other DBs
NCBI-GeneID:
117918268
NCBI-ProteinID:
XP_034690667
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Position
7:complement(22899618..22916785)
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AA seq
832 aa
AA seq
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MGDSETVVAQTSGVVGYTYSSTEYAGTGSNAVADAGAFAAVDTRTLAGSAAPADAAYSLT
DGSNLGEGNTYGTDPNTVMQEAPGSITYEASAGATETSSNLAAAELSQATGYDSSVNGNA
VTEARNFPSVDNGNASDVGGAAVEPQFEEGSVPAMSAEEDRLWSIVRANSLDFNAWTALI
EETEKIAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARLGSIEKVVEVYERAVQGVT
YSVDIWLHYCIFAISTYGDPDTIRRLFERGLAYVGTDYLSYPLWDKFIEYEYTQQEWSRL
AMIYTRILENPNQQLDRYFNSFKELAGSRPLSELTTAEEAAATAGAFSDANGQGIEGEAR
PDEVEQSSKPVSAGLTDAEELEKYIAIREEMYKKAKDFDSKIIGFETAIRRPYFHVRPLN
VAELENWHTYLDFIERGDDFNKVVKLYERCLIACANYPEYWIRYVLCMEASGSMDLANNA
LARATQVFVKRQPEIHLFAARFREQKGDIPGSRAAYQLVHTEISPGLLEAIIKHANMEHR
LGNLEDAFSLYEQAIAIEKGKEHSQTLPMLFAQYSRFLYLVTGNTEKAREILVEALEHVQ
LSKPLLEALIHLESIQSLPKRIDHLDSLVDKFIHTNPESPNAASAAEREELSSIFLEFLD
LFGDAQSIKKADDRHAKLFLHHRSTSELKKRHAEDFLASDKAKLAKSYSGVPSPAQSLMG
AYPTAQNQWASGYGLQPQAWPQATQAQGQQWNPGYTQQAAYNAYSGYGSSYTHPQIPTSV
PQTAAYGAYPPTYPVQAAPQQGYAQPAAAAAAALAPAQQPASASQAYYGSYY
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgggagacagtgaaacggtggttgcacaaacatctggagtcgtggggtacacatattct
tccaccgaatatgctggtactggctcaaatgctgttgctgatgctggtgcctttgcagct
gtagataccagaactttagctggatctgctgctcctgcagatgcagcatattctctgact
gatggttcaaatttaggtgaggggaacacatatggcacagatccaaatactgttatgcaa
gaggcccctggtagtataacctatgaggctagtgctggtgcaactgagactagctcaaat
cttgcagctgctgagttgtctcaagctactggttatgactcatctgtaaatggaaatgct
gttactgaagctaggaatttcccttctgttgacaatggaaatgcttctgatgttggtgga
gctgctgttgagccacagtttgaggaaggttctgtgccagcaatgtctgctgaagaagat
cgattgtggagtatagtgagagctaattctttagattttaatgcatggactgccctaatt
gaagagacagagaagattgcggaggacaacatattgaaaatccgaagggtttatgacgcc
tttttagcagaatttcctttgtgttatggttattggaagaagtatgcggatcatgaggca
cgtcttgggtctattgaaaaagttgttgaggtctatgaacgggcagttcaaggtgtgact
tattctgtggatatttggttgcactattgcatatttgccataagcacatatggagatcca
gatacaatcagaaggctgtttgaacggggactagcttatgtaggaacagattacctgtca
taccccctttgggataaattcatagaatatgagtatacacagcaggagtggtcgcgtctt
gcaatgatctacacgaggatattggagaatccaaatcagcaactggatcgctatttcaac
agcttcaaggagttagctggaagtcgccccttatcagaattaactactgctgaggaagca
gctgctactgcaggtgcattttcagatgctaatggccaagggattgagggggaggctcgt
cctgatgaagtggaacaatcttctaaacctgtaagtgcaggcttaacagatgcagaggag
ttggagaagtatatcgccattagagaagagatgtataagaaagctaaagactttgattct
aagatcattggctttgaaacagctatcaggaggccctactttcatgtgcggccccttaat
gttgcagagcttgaaaattggcatacctatctggattttattgaaagaggagatgacttt
aacaaggttgttaaattatatgaaagatgcctaattgcatgtgcaaattatcccgagtac
tggatacgatatgttttatgcatggaggccagtggaagcatggatcttgcaaacaatgcc
cttgctcgtgctactcaagtttttgtcaagcgacagccagagatacatctttttgctgct
cgattcagagagcagaagggggatattccaggatctcgggctgcgtatcaacttgtgcat
actgaaatttcacctggtctactagaagcaattattaagcatgcaaacatggaacatcgg
ctaggaaatttggaagatgccttttctttgtatgagcaggctatcgccattgaaaagggg
aaagaacattcacaaacattaccaatgctgtttgcacagtattcccgttttctatacttg
gttactggcaacactgaaaaggctagggaaattttagttgaagctcttgagcatgttcaa
ctgtcaaaaccacttcttgaggccttaatccatctagaatcaattcaatcacttccaaag
cgaattgatcatttagattcattggttgataagttcattcataccaaccctgaaagcccc
aatgctgcaagtgctgctgaaagagaagagctatctagcatctttttggaatttctggat
ctctttggagatgcacagtctatcaagaaggctgatgatcggcatgccaagcttttctta
caccatcgaagtacatcagagttgaaaaagcgtcatgcggaggattttctagcttcagac
aaagcaaaactagccaaatcttactctggtgttccctcacctgctcagtcattgatgggt
gcatatccaactgctcaaaaccaatgggcttcaggttatggtttacagccccaagcttgg
ccacaagctacgcaagcacagggtcaacagtggaacccaggttacacccagcaggctgca
tacaatgcatatagtggttacggaagcagctatacccacccacaaataccgacatcagtg
ccacagactgctgcttatggtgcttatcctccaacatatcctgttcaggctgcgccccag
caaggttatgcacaaccagctgcagcagcagcagcagcattggccccagctcagcaacca
gcttcagcatctcaggcctattatgggagttactattga
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integrated database retrieval system
