Vitis riparia (riverbank grape): 117918299
Help
Entry
117918299 CDS
T07274
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
117918299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117918299
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117918299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_14
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
117918299
NCBI-ProteinID:
XP_034690728
LinkDB
All DBs
Position
7:complement(28054127..28058152)
Genome browser
AA seq
576 aa
AA seq
DB search
MAYSFPEEVLEHVFSFIHTDKDRNAISVVCKSWYEVERWSRRRIFIGNCYAVSPGIVIRR
FPELRSVALKGKPHFADFNLVPEGWGGNVYPWIAAMAMAYPMLEELRLKRMVVTDESLEL
ISRSFKNFKVLVLSSCEGFSTDGLAAIAANCRNLRELDLRESEVDDFSGHWLTHFPDSCT
SLVSLNISCLASEVSFSALERLVGRCPSLRTLRLNRAVPLDRLPNLLRRAPQLVELGTGA
YSAEHRPEVFSSLAGAFSNCKELKSLSGFWDVVPDYLPAVYPACSGITSLNLSYATIQSP
DLIKLVTQCQNLQRLWVLDYIEDSGLDALAASCKDLQELRVFPSEPYDMEGNVALTEQGL
VSVSEGCPKLHSVLYFCRQMTNAALVSIAKNRPNMTRFRLCIIEPRTCDYQTLEPLDVGF
GAIVEHCKELHRLSLSGLLTDRVFEYIGTHAKKLEMLSVAFAGDGDLGLHHVLSGCKSLR
KLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSFGACKLLGQKMPRLNVEAMDERGGP
DSRPESCSVEKLYIYRSVAGPRSDMPRFVWTMKTPS
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactcgtttccggaagaggttttggagcatgtgttttctttcattcataccgat
aaggaccgaaacgcgatatctgtggtgtgcaaatcgtggtatgaggtggagcggtggagc
cggcgacggatcttcatcgggaactgttacgctgtgagccctgggatagtgatcaggcgc
ttcccggagctccggtcagtggcgctgaaggggaagccgcattttgcagactttaatctg
gtgccggaggggtggggaggtaacgtttatccgtggatcgctgccatggctatggcttac
ccgatgttggaagagttgaggttgaagaggatggtggtgacagacgagagcttggagctg
atctcgcgctcgttcaagaatttcaaggttttggtgctctcgtcgtgcgaggggttcagt
acggatggactcgctgccattgccgcaaattgcaggaatctgagagagctggacttgcga
gagagtgaagtggatgacttcagtggacattggctcacccatttccctgattcttgcaca
tcactggtgtccctcaacatttcctgcttggcctccgaggtgagtttctctgccctggag
cgcctggtgggtaggtgtcccagtctgaggactctccggctcaaccgtgctgtgcccctt
gacaggcttcccaacctattacgcagggcgcctcagctggttgagctgggtacaggtgcc
tactcagctgagcaccggcctgaagtgttctcaagtttagcaggagctttttcaaactgc
aaagagctcaagagtctatctggattttgggatgtggtcccggattaccttccagctgtt
tatcctgcctgttctgggatcacatctttgaacttgagctatgccactatccaaagtcct
gatctcatcaagctggtcacccagtgtcagaatttgcagcggctatgggtacttgattac
attgaagacagtggcctagatgctctagctgcatcttgcaaagatctgcaagaactgagg
gtgttcccttctgaaccatatgacatggagggaaatgtagccttgacagaacaagggctt
gtctctgtttctgaaggctgccctaagctccactctgtgctatacttctgccgtcaaatg
acaaatgctgccttagtttccattgccaaaaatcggccaaacatgactcgtttccggctc
tgcattattgaaccccggacttgtgattaccaaacactggagccacttgatgtgggtttt
ggagccattgttgagcactgtaaagaactacatcgcctttccctctctggtcttctcact
gaccgggtgtttgagtacattggaacccatgccaagaagctagaaatgctatctgtggct
tttgctggagatggtgatttggggctccatcatgttctgtctgggtgcaaaagcctccgg
aagttagagatcagggattgtccctttggggacaaggctctcttggccaatgctgcaaag
ctggagacaatgcgatccctttggatgtcttcttgctcagtgagttttggagcatgtaag
ctgttaggtcagaagatgcccagactcaatgttgaggctatggatgaaagggggggacca
gattcaaggccagaaagctgctcagtggagaagctttacatatatagatcagttgctggg
ccaaggagtgacatgcctcgatttgtgtggacaatgaagactccgagttga
DBGET
integrated database retrieval system
