Vitis riparia (riverbank grape): 117918392
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Entry
117918392 CDS
T07274
Name
(RefSeq) sister-chromatid cohesion protein 3 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vri03036
]
117918392
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
117918392
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Paralog
GFIT
Motif
Pfam:
HEAT_SCC3-SA
SCD
STAG
Motif
Other DBs
NCBI-GeneID:
117918392
NCBI-ProteinID:
XP_034690902
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Position
7:28241237..28253321
Genome browser
AA seq
1148 aa
AA seq
DB search
MEDAAQPSEITTRRSKRARVPAKTKFGENQSQDRTSEPSDQSPSEADREGSVDEFVEPRA
RAKRNRTEGSSTAAKKFDQSLIEVIKGNGKLIPQVVKLWVEQYEKDPKPAMVELLMMLFE
ACGAKYHLREELLDETDVDDVVVALVNLARRGEAEDYQSSKKKEFKNFKDNLVSFWDNLV
IECQNGPLFDQVLFDKCVDYIIALSCTPPRVYRQVASLMGLQLVTSFITVAKMLGAQRET
TQRQLNAEKKKRTEGPRVESLNKRLSTTHEKITVIEEMMRKIFTGLFVHRYRDIDQDIRM
SCIQSLGVWIISYPSLFLQDLYLKYLGWTLNDKSAGVRKASILALQNLYDVDDNVPSLGL
FTERFSNRMIELADDIDVSVAVCAIGLVKQLLRHQLLADDDLGPLYDLLIDDSTEIRHAI
GALVYDHLIAQKFNSSQSHAKGDDGDSSEVHLGRMLQILREFSADPILSIYVIDDVWEYM
NAMKDWKCIISMLLDENPLIELTDEDATNLIRLLCASVKKAVGERIVPATDNRKQYYNKA
QKEIFEHNRRDITVAMMKNYSQLLRKFMADKAKVPSLIEIILHMNLELYSLKRQEQNFKT
LLQLMREAFFKHGEKDALRSCVKAINFCSSECQGELKDFAQNKLKELEDELIAKLKTAIK
EVADGDDEYSLLVNLKRLYELQLSRSVPIESLYEDMVMILKSSKSMDDEVVSFLLHNMSL
HVAWCLHAIINSDTVSEESLSSLLSKRTTLFEQLEHFLHAHTEVQEEGKRANQPACRVCI
ILAQVWCLFKKTKFSSTKLESLGYCPDSSVLQKFWKLCEQQLNISDETEEDDVNQEYVEE
TNRDAVMIAAAMLVATDVVPKEYLGPEIISHFVMHGTSIAEIVKNLIAVLKKKDDDVPNI
FLEALRRAYHRHLVELSRSDDTSLASKSVKDCKDLAARLSTTFMGAARNKHRLDILRIVK
DGIDYAFVDAPKQLSFLEIAVLHFVSRLPTSDVLEILKDVQKRTENVNTDEDPSGWRPYY
TFIDSLREKYSKNDGFQVSVADEKEGTSVRRRGRPRKRRNIQGKKLFDDHSSSEEDSISA
SDDDARDDEERQGEEEEEEAPLIQSIRSSAKLRSLRVSREENKGPTKPGDSGRATNAIAA
SRTSGASS
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgcagcccaaccttccgaaatcaccactcgccgctcgaagagagctagggtt
cctgctaagaccaaattcggagagaaccagagccaagacaggaccagcgaacccagcgat
cagagccctagtgaggcggaccgagagggatccgtcgatgaattcgtcgaacctcgcgca
agggctaagagaaatcgaacagaagggtcctctaccgcggctaagaaattcgaccagagc
ttgattgaggttatcaaaggaaatggaaaactcattcctcaagtggtaaagctttgggtt
gagcaatatgaaaaggatccaaaacctgcaatggttgaactcttaatgatgctgtttgag
gcatgtggagctaaatatcatctcagagaagagctcctggatgagactgatgttgatgat
gtagtggttgctcttgtcaacctggctaggagaggggaagctgaagattatcaaagttca
aaaaagaaggagttcaagaacttcaaagataaccttgtatcattctgggacaatttggtc
attgagtgtcaaaatgggccattgtttgatcaggttctgtttgataagtgcgtggattac
ataattgcgctgtcctgcactcctccaagagtttatcggcaagttgcttctctgatgggt
ctccagcttgtgacatccttcatcactgttgctaaaatgcttggtgcacaacgagaaact
actcagagacaattaaatgctgaaaagaagaaacgaacggaaggacctcgtgtggagtca
ctgaataaaaggttatcaacaacacatgaaaagataacagtaatagaggagatgatgcgc
aaaatttttaccgggttatttgtgcatcgatatcgtgatattgatcaggatattagaatg
tcatgcatacagtctctgggtgtatggattatatcatatccatcactgttcttgcaggat
ttatatttaaagtaccttggatggacattgaatgacaaaagtgctggtgtcagaaaagct
tctatccttgcattgcaaaatctttatgacgtggatgataatgtgccttctcttggcctt
tttactgaaagattttctaaccgcatgattgagcttgctgatgatattgatgtttctgtg
gctgtttgtgccatagggcttgtaaaacaactactaagacatcaacttttagctgatgat
gacttaggtcccttgtatgatttgcttattgacgattcaacagaaataagacatgccata
ggagcactagtgtatgatcacttgattgctcaaaaatttaatagctcccaatctcacgca
aaaggtgatgatggagattcttctgaggttcatcttggtcgaatgttgcaaattctgaga
gaattttcagcagatccaattcttagtatctatgtcattgatgatgtttgggagtacatg
aatgctatgaaagattggaagtgtattatctccatgcttttggacgagaatccattgatt
gaacttactgatgaggatgcaactaacctaattcgacttctttgtgcatctgttaaaaag
gctgtaggagagaggattgttcctgctactgataatcggaaacaatattacaataaagct
caaaaagaaatatttgaacacaacagacgtgacataactgtcgccatgatgaagaattat
tcacaacttcttcgcaaattcatggctgataaagcaaaagtaccatcattgattgaaatt
attttgcacatgaaccttgagctttactccctgaagagacaggagcagaatttcaagacc
cttcttcagctcatgagggaggcattttttaaacatggtgagaaggatgctttgagatct
tgtgtgaaggctattaacttttgttccagcgaatgtcaaggagaactgaaagattttgcc
caaaataagctgaaggaacttgaggatgagcttattgctaagcttaaaactgcaataaaa
gaagttgcggatggtgatgacgaatactcccttcttgtaaatttgaaaaggttatatgaa
cttcaattgtcgagatctgtacccattgaaagtttatatgaagatatggtcatgattctt
aaaagttccaaaagcatggatgatgaggttgtcagctttctgcttcacaacatgtctttg
cacgtagcctggtgcctgcatgctatcataaatagtgacactgtctctgaagaatcttta
tcatctcttttatcaaagcgcactaccttgtttgagcaacttgagcactttcttcacgcc
cacactgaagttcaagaggagggtaaacgtgcaaatcagccagcttgcagagtgtgtatc
atacttgcacaagtttggtgtcttttcaaaaagacaaaattttcttcaaccaaactggaa
agtttagggtattgtccagattcatctgttcttcaaaagttctggaaactttgtgagcaa
caactcaatatttcagatgagacagaagaagatgatgtgaatcaagagtatgtcgaggag
acaaatagggatgcagtcatgattgctgctgcaatgttggttgctactgatgtggttcct
aaggagtatcttggtccagagatcatttctcattttgtgatgcatggaacaagcatagca
gagattgttaagaatctgatagctgttctgaagaaaaaagatgatgatgtccccaatatc
tttctagaagcattgagaagggcctaccaccgccatctggtggagctttccagaagtgat
gacacgtccttggcaagcaagtctgttaaagattgcaaagatctggctgctcggctttct
acaacattcatgggtgctgctcgaaacaaacatcgattggacattttaagaattgtcaag
gatggtattgattatgcttttgtagatgctccaaagcagctctctttcttggaaattgct
gtactccattttgtatccagacttcctacatctgatgtcctggaaattctaaaggatgtt
caaaaacgaacggagaatgtaaatacagacgaagatcctagtggatggcgcccttattac
acgtttattgacagcctacgtgagaagtactcaaagaatgatggattccaagtttcggtt
gcagatgaaaaagaaggtacttctgtaagacgccgaggtcgcccacgcaaacggcgtaat
atacagggcaaaaaactctttgatgatcacagttcaagtgaagaagattcaattagtgca
tcagatgatgatgctcgagatgatgaagagaggcaaggggaagaggaagaggaggaagct
cctttgatacagtctattagatcatcagccaagttgaggtcattgagagtttcaagagag
gaaaacaaaggcccgacaaagcctggagattctggaagagcaacaaatgctatagccgct
tccagaacatcaggggcctccagctag
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