Vitis riparia (riverbank grape): 117918422
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Entry
117918422 CDS
T07274
Name
(RefSeq) E3 ubiquitin-protein ligase HEL2-like
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117918422
Enzymes [BR:
vri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117918422
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117918422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH_ZNF598
zf-C2H2_13
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
117918422
NCBI-ProteinID:
XP_034690958
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All DBs
Position
7:complement(25841991..25848090)
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AA seq
842 aa
AA seq
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MDDSCAVCAETLEWVSYGPCGHRDVCSTCVARLRFICDDRRCCICKTECNVVFVTKALGD
YTRMVNDFSILPTESREGQVGMYWYHEDTQAFFDDVDHYKMIKAMCRLSCSVCDQMEEQS
NDGSKRRQKFRNIDQLKGHLFHRHKLFMCSLCLEGRKVFICEQKLYNRAQLNQHINTGDS
EVDGNEAERGGFMGHPMCDFCRSPFYGDNELYSHMSTEHYTCHICQRQNPGQFEYYKNYD
DLEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRMSRSKRNAALQIPTSFR
YRRSTEQDHRRGRGRTFNRDSSADQLSLAIQASLETANASDTYHDPPPSSSSSTQAVSDH
YDSDPIMQPFESLAMTDSESSSRYRQALGHNPMNVPLVESSFPPLATAPSSSLPKPKLDS
EGLPKNTMAARLRRPGKANVLHSGQGWPAPNRGSVPLSSSATQSKVANIAPVPSSSLDQV
KPATGSGSAPNSYASFAQARPTTVHGFASSGSSSNSGSISRISHSASAPNLADSKSFDPS
VSDFPPVSATQKQKLPTITQPVLNAEAVHTANKSLVEKIRAALEFDEDKYTAFKDISGQY
RQGSIDTAVYLAYVQQFGLSHLVLELARLCPDARKQKELLETYNASVRSSGLQENGWGHG
NVHFKDKKISKKGKGKPVVVEDSNVKDTLADSIINTVRNLQSTFKPSEEEVEVLSKDGYR
GAKGKSKGVIDEQQSDLSSAREPLPKLSAQNEVPSPGGGSNQNLGAASGGSQRRKKASKF
LRARLGDGSVGALLNSQDPDPDPDPVEETLDANMNPAEGLPVHGVWRNGGGQRLFSNGQK
RF
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggacgatagctgtgccgtttgcgccgagactctcgaatgggtttcgtacggaccatgt
ggccatcgcgatgtgtgctcgacttgcgtggctcgtcttcgcttcatctgcgacgatcgc
cgttgctgcatctgcaaaaccgagtgcaacgttgtctttgtcacgaaggccttaggagat
tatacaagaatggttaatgatttttcaatcctgccgactgaatcaagggagggtcaagtg
ggaatgtactggtatcatgaggacacacaagcattttttgatgatgtggaccactacaag
atgatcaaggcaatgtgcaggctttcttgcagtgtatgtgaccagatggaggaacaatca
aatgatggctcaaagagaaggcaaaagtttaggaatattgaccagttgaagggtcattta
ttccatcggcataaattgttcatgtgcagtttgtgtttggaaggaagaaaagtatttatt
tgtgaacaaaagctctacaatagagcacagttgaatcagcatataaacacaggtgactct
gaggtggatggaaatgaggctgaaagaggtggcttcatggggcatccgatgtgcgacttc
tgtagaagcccattttatggagataatgagctgtactcgcatatgtccacggaacattat
acctgtcatatatgccaaaggcagaaccctggacaatttgaatactataaaaattatgat
gacctagagatccatttccggagagaccatttcttatgtgaggacgaagcctgccttgca
aaaaagtttgttgtctttcaatctgaagcagaaatgaagaggcataatgctatagaacat
ggaggacgtatgtctcgctctaaacgtaatgctgctcttcagataccaacaagttttcgc
tatcgaagaagtactgaacaagatcatcgccgtggaagaggaaggacatttaatcgtgat
tcctctgctgatcaactctccttggccattcaagctagtttggagacagctaatgcaagt
gacacatatcatgatccacccccatcatcatcatccagcactcaggcagtttctgatcat
tatgatagcgatcccataatgcagccatttgaatcgttggctatgacagattctgaatct
tcttcgagatatcgtcaagccttgggtcataacccaatgaatgtacctcttgtggagtct
tcctttcctcctctcgccacggcacccagcagcagtctaccaaaacccaaacttgactca
gaaggtttgccgaaaaataccatggctgcacgtctccgccgtccaggtaaggcaaatgtt
ctccattcaggtcagggttggccagccccaaatcgtggatcagtcccactatcaagtagt
gcaactcaatctaaggttgcaaatattgcacctgtgccatcatctagtctggatcaggtt
aagccagcaactggtagtggatctgctccaaacagctatgctagttttgctcaggctcga
cccacaacagtgcatggatttgcatcatctggttcttcaagtaactcaggcagcataagt
aggatcagccactctgcatcagccccaaatcttgctgatagcaaatcttttgatccttct
gtgtctgattttcctccagtttctgcaacacaaaagcaaaagttgccaacaattacccag
cccgtgctgaatgcagaagctgttcacactgcaaacaagtctctggtggaaaagatccgt
gctgctcttgaatttgatgaagacaaatacaccgcttttaaagacatatccgggcagtat
cggcaaggttcaattgacaccgcagtatatctggcttatgttcagcagtttggtttgtca
catcttgttcttgaattggctagactctgtcctgatgctcggaagcagaaagaactttta
gagacctataatgctagtgtacggagcagtggtttacaagaaaatggttgggggcatggc
aatgtccattttaaagacaaaaagatctccaagaaaggtaaaggaaaacctgtagttgtg
gaggacagtaatgtgaaggatacattagcagatagcatcattaacacagttaggaacctt
cagtccaccttcaagccttcagaagaagaggtggaggtgttgtcaaaggatgggtaccgt
ggtgcaaaaggcaaatcaaagggagtgattgatgagcaacagtcagatctgagttctgct
agagaacccttaccaaagctgagtgcccaaaatgaggtgccatcaccgggtggtggatct
aatcaaaatttaggggctgcgagtggaggaagtcagcgacggaagaaagcatcaaaattc
ctcagagcccgtctgggtgatggttcagtgggtgcacttctgaactcccaagatcctgac
ccagatccagatccagtggaggaaacattagatgcaaacatgaatccggctgaaggctta
ccagttcatggtgtttggcggaatggtggtggtcagagactttttagcaatggccagaag
agattctaa
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