Vitis riparia (riverbank grape): 117918468
Help
Entry
117918468 CDS
T07274
Name
(RefSeq) sm-like protein LSM2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03018
RNA degradation
vri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117918468
09123 Folding, sorting and degradation
03018 RNA degradation
117918468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117918468
03041 Spliceosome [BR:
vri03041
]
117918468
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117918468
mRNA degradation factors
5'-3' decay
Lsm complex
117918468
Spliceosome [BR:
vri03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
117918468
Complex C
U2 snRNP components
117918468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF150_C
DUF1256
Motif
Other DBs
NCBI-GeneID:
117918468
NCBI-ProteinID:
XP_034691046
LinkDB
All DBs
Position
7:28620360..28626187
Genome browser
AA seq
93 aa
AA seq
DB search
MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
FIRGSVVRYVQLPPEGVDIELLHDATRREARGG
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcttctcgtacttcaaggacttggtgggtagagaagtgactgtggagctcaag
aatgacctggcaataagagggactcttcactctgttgatcagtatctcaatatcaagctt
gagaacactagagtcgttgaccaagacaagtaccctcacatgctatcggtgaggaattgt
ttcataagaggatcagtggtgagatatgttcaactgcctccagagggagtcgacatcgag
ctgttgcatgacgccaccaggagggaagctcgaggtggctaa
DBGET
integrated database retrieval system