Vitis riparia (riverbank grape): 117918511
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Entry
117918511 CDS
T07274
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vri03041
]
117918511
Spliceosome [BR:
vri03041
]
Common components
Common spliceosomal components
General mRNP proteins
117918511
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
117918511
NCBI-ProteinID:
XP_034691125
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All DBs
Position
7:complement(2743407..2758535)
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AA seq
608 aa
AA seq
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MDFDEYEYLEKAVEEPENRKKKDGGEKSERSYRKREGGEEDDDDERGEGRRSKRSRGEEL
NGERRERHEKDRRRSGRDGERESKDRKSEREKDRGREREKERGRDREKDKERDREKDKER
DREKDKERERERDKERERERERERERDKERERKEREREKEKEREKAKEKERRELEKEERE
EKERSRRSTSRSRRHESDRDRELRERSREIEPRESRRFKDKKEAVEPEADPERDQRTVFA
YQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGHL
LHGQPVMVKPSEAEKNLVQSNASGAVSGGIAGPYGAVDRKLYVGNLHFNMTELQLRQIFE
PFGRVELVQLPLDLETGQCKGFGFVQFAELEHAKAAQNLNGKLDIAGRIIKVSSVTDHIG
VQDAGAKAADFDDDDGGGLSLNAQSRALLMQKLDRTGIASSIAGSLGVPMLNGSAPNQQA
ISLSINGQAAVSAPSLPTQVVTSPASEPVGTPTECLLLKNMFDPATEIDPDFDLDIKEEV
QEECSNFGRVKHIYVEKHSAGYVYLRFETVEAAVTAQRAMHMRWFARRLISAIFLQPRDY
EAKFKGET
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggactttgacgagtacgagtatctggaaaaggcggtggaagagcctgagaatcggaag
aagaaagacggaggggagaagagcgagaggagttacagaaagagggaaggcggtgaggaa
gacgacgatgacgaacgaggagaagggcggaggagcaagaggtctagaggcgaagagttg
aacggcgaaagaagggagcggcacgaaaaggatcggcggagaagcggcagagatggcgag
agagagtctaaggataggaaatccgagagagaaaaggatcggggacgtgagagagagaag
gagagagggagggacagagagaaagataaggagagggacagagagaaagataaggagagg
gacagagagaaagataaggaaagggaaagagagagagataaagagagggagagggagagg
gagagggagagagagagagataaggaaagggagagaaaggagagggagagagagaaggaa
aaggagagagagaaggcgaaggagaaggagagaagagagttggagaaggaggagagggag
gagaaagagaggtcgcgcagaagtacaagcaggtcgaggcggcatgagagtgatcgtgat
agggaattgagagagagatcacgagaaattgagccaagagagagcaggagatttaaagat
aagaaagaagctgtggagcctgaagctgatccagaaagggaccagagaactgtttttgcc
taccagatgcctctgaaggcaactgagagagatgtttatgagtttttctcaaaagcgggc
aaggtgagggatgtccggttgatcatggatcggaattcaagaaggtcaaaaggagttgga
tatatcgaattttatgatgcaatgtctgtgccaatggcaattgctctctctggtcatctt
cttcatggacaacctgtgatggttaagccatcagaggctgagaagaaccttgttcagtcc
aatgcttctggtgcagtctcgggaggtatcgcaggaccatatggagcagttgatagaaag
ttgtatgtggggaacttacacttcaacatgacagaacttcaacttcgacagatttttgaa
ccgtttggtcgtgtggagcttgtgcaattacctcttgatcttgagacaggacagtgcaaa
ggttttgggtttgttcaatttgctgaacttgagcatgcaaaggcagcacaaaatttgaat
gggaaattggatattgctggtcgaataatcaaggtttcatcagttacagatcatattgga
gtgcaagatgctggagcaaaagctgccgatttcgatgatgatgatgggggtggtttgtca
ttaaatgctcaatccagagcattgctcatgcagaaactggatcgtactggtattgcctca
agtattgcaggctccctaggtgtgcccatgcttaatgggtcagctccaaatcaacaagcc
attagcttgtctattaatggccaagctgctgtttctgctccatctcttccaacacaagtt
gtcacttccccagcctctgaacctgttggaacccccaccgagtgcttactgttgaagaat
atgttcgatccagccactgagattgatccggattttgatttggatatcaaagaggaggtg
caagaagaatgttctaattttggccgggtgaagcatatctatgtggaaaagcatagtgct
ggttatgtgtatttgcggtttgaaacagtggaagcggcagtcactgctcaacgtgcaatg
catatgagatggtttgcccgcaggttgatttcagccatattcctgcaacccagggattat
gaagccaagtttaaaggtgaaacctga
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