Vitis riparia (riverbank grape): 117918515
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Entry
117918515 CDS
T07274
Name
(RefSeq) long chain base biosynthesis protein 1 isoform X1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00600
Sphingolipid metabolism
vri01100
Metabolic pathways
vri04382
Cornified envelope formation
Module
vri_M00094
Ceramide biosynthesis
vri_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
117918515
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117918515
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vri01007
]
117918515
Enzymes [BR:
vri01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
117918515
Amino acid related enzymes [BR:
vri01007
]
Aminotransferase (transaminase)
Class II
117918515
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
OKR_DC_1
Cys_Met_Meta_PP
Aminotran_5
DUF751
Motif
Other DBs
NCBI-GeneID:
117918515
NCBI-ProteinID:
XP_034691128
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Position
7:340989..354806
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AA seq
483 aa
AA seq
DB search
MASAVTDIVTTAVDWVTLAFNAPLPRAVVFGVQIGGHLFVEVVLLLAIIFLLSQKSYKPP
KRPLTKKEIDELCEEWVPESLIPPLTEEMQCEPPVLESAAGPHTVINGKEVVNFTSANYL
GLIGHEKLLESCTAALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLS
TMFSAIPAFCKRGDIIVVDEGVHWGIQNGLYLSRSTIVYFKHNDMESLQNTLEKITLENK
RAKKLRRYIVVEAVYQNSGQIAPLDEIIRLKEKYRFRVLLDESNSFGVLGSTGRGLTEFF
RVPIEKIDIITAAMGHALATEGGFCTGSTRVIDHQRLSSSGYVFSASLPPYLASAAITAV
DVLEENPDLIMKLKENIAVLWQELSDIQGLSIASNPLSPIVFLRLENSTGSLKNDLHLLE
DIVDHMLNKDSVFVVASKRSTLDKCRLPVGIRLFVSAAHTESDLLKASESLKRAAASVLA
GSS
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagctgttacagatatagtgactactgcagtagattgggtgacattggcattt
aatgctcctttaccccgggctgttgtttttggagtgcaaattggcgggcatttgtttgtg
gaagttgttcttctgctggccattattttcctactttcccaaaagagctacaaaccccct
aaacgcccactaacaaagaaggaaatagatgagctgtgtgaagaatgggttccagaatcc
ctgattcctcctcttacagaagagatgcagtgtgaacctccagtattggaaagtgccgca
gggccacatacagtaatcaatggcaaagaagtagtgaactttacttcagcaaattacctt
ggattgattggacatgagaagttactggaatcttgcactgctgcactggagaaatatggt
gttggttcttgtggtcctcgtggtttctatggaacaatcgatgttcaccttgattgtgag
gccagaatagcaaaatttttgggcactcctgattcaatactctattcttatggactttcc
accatgttcagtgcaatcccagcattttgtaaaagaggagacatcattgttgtggatgag
ggagtccactggggaatacaaaatggcctttatctttctagaagtacaatagtgtatttc
aagcacaatgacatggagtctttgcaaaatactctagagaaaattactttagagaacaag
agggctaagaagctgcggcgttatattgtggttgaagctgtgtaccagaattctggccaa
atagctccattagatgagattatcagattgaaggagaaataccgcttccgtgtcttattg
gatgagagtaactcatttggtgtgttgggcagcactggaagaggtctcaccgagttcttt
agggttccgattgagaagatagatattataactgctgccatgggacatgcattagccaca
gaaggaggattctgcactggaagtactcgagtcattgatcatcaacgtctgagcagttct
ggatatgtcttctctgcttctttgcccccctatctcgcaagtgctgcaattactgctgtc
gatgtcctggaggaaaatcctgatctgattatgaagctgaaggaaaatattgctgtatta
tggcaagaattgtcagatatacaaggcctttcaatagcaagcaatccactatcacccata
gtctttctcagactagagaattcgacaggttccttaaagaatgacctccacctgcttgaa
gatattgtggatcacatgctgaacaaagactctgtttttgttgtggcttccaagagatcc
acacttgataaatgtcgtctgcctgttggaatcagactatttgtttctgctgcacatacc
gaatctgatctcttgaaggcatctgaatcattgaaaagagctgcagcatcagtgctggcg
ggttctagttga
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