KEGG   Vitis riparia (riverbank grape): 117918893
Entry
117918893         CDS       T07274                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117918893
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vri03019]
    117918893
   03041 Spliceosome [BR:vri03041]
    117918893
Messenger RNA biogenesis [BR:vri03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     117918893
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117918893
Spliceosome [BR:vri03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    117918893
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 HCV_NS4b
Other DBs
NCBI-GeneID: 117918893
NCBI-ProteinID: XP_034691754
LinkDB
Position
7:complement(3542172..3548273)
AA seq 396 aa
MAKTKKSKKQKLTKKTPKKIEKKLKSKKVEKALATKPSDSDSDSDSGFDKLQKLLEPYSK
DQLIGFISDAAASDSSLFQRIRETADRDVSHRKIFVHGLGWDTTRETLLAAFEPYGQIED
CNVVTDRNTGKAKGYGFVLFKTRQGAVKALKQPGKKINNRMTQSQLASMGPSPPPQSQDT
VGRKIYVSNVQADVDPERLQSFFAKFGEIETGPIGFDTQTGKSRGFALFVYKNQESARKA
LEDPYRIFEGHQLHCQKATEGKNKVPAQPQPQLAAVAATQNFMLSQHPTLNTFYSGLLAH
PNASMIGAAAVNPAVAGAMNPGVISSSQVGSVIGSVEGLGGYGTHGVAGFGGTPSVLGPP
SLGLQHAYPSTQLGQSSVGRVQGTGVGTFGGYPSYM
NT seq 1191 nt   +upstreamnt  +downstreamnt
atggccaagaccaagaaatcgaagaagcaaaagctcactaaaaagactcctaagaagatc
gagaaaaagcttaaatccaagaaggtggaaaaagccctagccaccaaaccttccgattcc
gactccgattcagactccggcttcgacaagctccagaaacttctcgaaccttactctaag
gatcaactcataggctttatttccgatgccgccgcctccgattcctctctcttccagcgc
atccgcgaaaccgccgatcgcgacgtctctcaccggaaaatcttcgtccacggcctcggt
tgggacactactcgcgaaaccttgctggcggcgtttgaaccctatggccaaattgaggac
tgcaatgtcgtcacggatcggaatactggaaaggccaagggctatggattcgttctcttc
aagacgcgccaaggtgctgtcaaggcgctgaagcagccggggaagaagattaataaccgt
atgacgcagagccagctcgcgtcgatgggtccgtcgcctccgccgcagagccaggacacc
gtcggccggaagatctacgtgagtaatgttcaggccgatgtggatcctgagagattgcag
tcgttctttgcgaagttcggggagatcgagaccggaccaatcgggttcgacacgcagact
gggaagtcgagggggtttgcgctttttgtgtataagaatcaggaaagcgcaaggaaggct
ctagaagatccgtacaggatatttgaggggcatcaattgcattgccagaaggcaacggag
ggaaagaacaaggtcccggcacaaccgcaaccacagctggcagcggttgctgcgacgcag
aatttcatgttaagccagcatccaactctcaatacgttttacagtgggttgctcgcccat
ccgaatgcaagtatgattggggcggcggcggttaatccggcggtagcaggagctatgaac
ccgggcgtgatttcgtcgagccaagttggttcggtcattggtagtgtggaaggtttagga
gggtatgggacgcatggggtggctggttttggggggactccttcagtgctcggccctcca
agtctcggtctgcagcatgcctacccgagtacacagctcgggcaatcttcggtgggtagg
gttcaagggactggtgttgggactttcggtggttacccgtcgtatatgtga

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