Vitis riparia (riverbank grape): 117919049
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Entry
117919049 CDS
T07274
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117919049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vri03041
]
117919049
Spliceosome [BR:
vri03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
117919049
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
117919049
NCBI-ProteinID:
XP_034691985
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Position
1:complement(9913119..9922405)
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AA seq
489 aa
AA seq
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MSEFKAALSDPFLADLEELSDNEADLANEDDMGVGNMEEDDDGEMADIEALNYDDLDSVS
KLQKTQRYIDIMQKVEDALEKGSDMSNHGIVLEDDPEYQLIVDCNALSVDIENEIVIIHN
FIRDNYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTT
SGKPLPEENLKKTVDACDRALALDLAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGT
AGGLTALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPSLRMRACRL
LAAKSTLSARVDSTRGDPTGKTGRTLREEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKR
GGRRLRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGNGKLRVSVGQS
KLAAKVAKKFKEKQYGSSGATSGLTSSLAFTPVQGIELSNPQAHANQLGSGTQSTYFSEI
GTFSKIKRT
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagttcaaggcagctctttctgatcctttcctggcagatttggaggaattgtca
gacaatgaagccgatcttgctaatgaagatgacatgggtgttggaaacatggaagaagac
gatgatggggagatggcagatattgaagctcttaattacgatgatctggacagtgtctca
aaattacagaaaacacaacgttacattgacattatgcagaaagttgaagatgcgctagag
aaggggtctgatatgtcaaatcatgggatagttttggaagatgatcctgaataccagttg
atagtggattgcaatgcattgtcagttgatattgagaatgaaattgttattatccacaac
tttatccgtgataactaccgtttgaaatttccggagcttgagtcacttgtgcatcaccca
attgattatgctcgagttgttaagaagattgggaacgaaatggatttaacccttgttgac
cttgaggggcttttaccttcagctatcattatggttgtttcagttacagcatcaactact
agtggcaagccacttccagaggaaaaccttaaaaagacagttgatgcatgtgacagagct
cttgctctagatttagctaagaaaaaagtccttgattttgtagagagcagaatgggttat
attgcgcccaatctttctgctatagttggcagtgctgttgctgctaaacttatggggact
gctggtggtctcacagcattagctaagatgccagcctgtaatgttcagcttcttggtgcc
aagaaaaagaaccttgcagggttttctactgcaacatcccaatttcgcgtaggttatatc
gagcaaacagagatatttcagagcacacccccttccttgagaatgcgagcctgccggctt
ttggctgcaaaatcaacactttctgcacgagtagattctacaaggggagatcctacaggg
aaaactggaagaaccttgcgagaagagatccttaagaagattgagaaatggcaagagcca
cctcctgcaaaacaacctaaacctcttccagttcctgattctgagcctaaaaagaagaga
ggtggtcgtcggctaaggaagatgaaggagaggtatgctataacggacatgaggaagctg
gccaataggatgcaatttggtgttcctgaagagagttctttaggggatggactgggggaa
ggatatggaatgctcggtcaggctgggaatgggaagttgcgtgtatcagttggtcagagt
aaacttgctgccaaagttgctaaaaagttcaaggaaaagcaatatggaagcagtggtgct
acctcaggactgacttcaagtttggccttcacacctgtgcagggaattgagctgtcaaat
ccccaggctcatgcaaatcagcttggaagtggaacccaaagtacctacttttctgaaata
ggaaccttttcaaagatcaagaggacctga
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